RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SENP8Q96LD8 212 aa3.97□□□□□ -1.77
RPL39-201ENST00000361575 OPRPNQ99935 248 aaPredicted RBP3.97□□□□□ -1.77
RPL39-201ENST00000361575 PUS3Q9BZE2 481 aaKnown RBP3.97□□□□□ -1.77
RPL39-201ENST00000361575 COMMD4Q9H0A8 199 aa3.97□□□□□ -1.77
RPL39-201ENST00000361575 RNF41Q9H4P4 317 aaPredicted RBP3.97□□□□□ -1.77
RPL39-201ENST00000361575 ELOVL3Q9HB03 270 aa3.97□□□□□ -1.77
RPL39-201ENST00000361575 RAB18Q9NP72 206 aa3.97□□□□□ -1.77
RPL39-201ENST00000361575 WWOXQ9NZC7 414 aa3.97□□□□□ -1.77
RPL39-201ENST00000361575 CTSZQ9UBR2 303 aa3.97□□□□□ -1.77
RPL39-201ENST00000361575 MRPS7Q9Y2R9 242 aaKnown RBP3.97□□□□□ -1.77
RPL39-201ENST00000361575 PTCH1Q13635 1447 aa3.96□□□□□ -1.77
RPL39-201ENST00000361575 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 GSAPA4D1B5 854 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 ZSCAN5BA6NJL1 495 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 PDHXO00330 501 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 CASKO14936 926 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 TYROBPO43914 113 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 SNNO75324 88 aaPredicted RBP3.96□□□□□ -1.78
RPL39-201ENST00000361575 ANP32DO95626 131 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 TPSB2P20231 275 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 LMO2P25791 158 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 CHI3L1P36222 383 aaPredicted RBP3.96□□□□□ -1.78
RPL39-201ENST00000361575 MFAP2P55001 183 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 EIF2B1Q14232 305 aaKnown RBP3.96□□□□□ -1.78
RPL39-201ENST00000361575 RAB35Q15286 201 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 TPSAB1Q15661 275 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 FAM74A3Q4VXF1 159 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 C2CD6Q53TS8 623 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 C9orf66Q5T8R8 295 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 BLOC1S2Q6QNY1 142 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 ANKRD37Q7Z713 158 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 PHC2Q8IXK0 858 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 LINC01561Q8N1V8 128 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 ELMO2Q96JJ3 720 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 C18orf12Q96KH6 178 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 ZNF597Q96LX8 424 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 SECISBP2Q96T21 854 aaKnown RBP3.96□□□□□ -1.78
RPL39-201ENST00000361575 ZDHHC18Q9NUE0 388 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 CIDEBQ9UHD4 219 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 ANAPC7Q9UJX3 599 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 HPCAL4Q9UM19 191 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 MGAT4AQ9UM21 535 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 OR10H1Q9Y4A9 318 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 CPQQ9Y646 472 aa3.96□□□□□ -1.78
RPL39-201ENST00000361575 FOXI3A8MTJ6 420 aaPredicted RBP3.95□□□□□ -1.78
RPL39-201ENST00000361575 STX7O15400 261 aaKnown RBP3.95□□□□□ -1.78
RPL39-201ENST00000361575 PPIHO43447 177 aaKnown RBP3.95□□□□□ -1.78
RPL39-201ENST00000361575 DCXO43602 365 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 SNX4O95219 450 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 POP4O95707 220 aaKnown RBP3.95□□□□□ -1.78
RPL39-201ENST00000361575 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 IGFBP5P24593 272 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 MAGEA5P43359 124 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 BDKRB1P46663 353 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 SLC7A2P52569 658 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 EWSR1Q01844 656 aaKnown RBP eCLIP3.95□□□□□ -1.78
RPL39-201ENST00000361575 ZIC1Q15915 447 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 GGTA1PQ4G0N0 100 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 KLHL22Q53GT1 634 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 CYBRD1Q53TN4 286 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 MS4A13Q5J8X5 152 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 ZC2HC1BQ5TFG8 222 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 STAC2Q6ZMT1 411 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 HSD11B1LQ7Z5J1 315 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 RNF130Q86XS8 419 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 LRRC43Q8N309 656 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 ANKFN1Q8N957 763 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 TBCKQ8TEA7 893 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 RLN3Q8WXF3 142 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 CRYGNQ8WXF5 182 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 SLC45A3Q96JT2 553 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 TUBB1Q9H4B7 451 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 MDFICQ9P1T7 246 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 EIF3LQ9Y262 564 aaKnown RBP3.95□□□□□ -1.78
RPL39-201ENST00000361575 AUP1Q9Y679 476 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
RPL39-201ENST00000361575 C15orf38-AP3S2A0A0A6YYH1 394 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 A8MXK9 166 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 ARHGEF9O43307 516 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 SURF6O75683 361 aaKnown RBP3.94□□□□□ -1.78
RPL39-201ENST00000361575 PALMO75781 387 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 MELTFP08582 738 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 TBXA2RP21731 343 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 PCMT1P22061 227 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
RPL39-201ENST00000361575 RIDAP52758 137 aaKnown RBP3.94□□□□□ -1.78
RPL39-201ENST00000361575 PLA2G16P53816 162 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 IRX1P78414 480 aaPredicted RBP3.94□□□□□ -1.78
RPL39-201ENST00000361575 ACY1Q03154 408 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 RIPK1Q13546 671 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 ATXN7L3Q14CW9 347 aaPredicted RBP3.94□□□□□ -1.78
RPL39-201ENST00000361575 C14orf28Q4W4Y0 310 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 FAM120AOSQ5T036 256 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 EMBQ6PCB8 327 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 KIAA1328Q86T90 577 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 Q8N377 158 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 EIF1ADQ8N9N8 165 aaKnown RBP3.94□□□□□ -1.78
RPL39-201ENST00000361575 OR8J1Q8NGP2 316 aa3.94□□□□□ -1.78
RPL39-201ENST00000361575 OR4Q3Q8NH05 313 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms