RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FAM118AQ9NWS6 357 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 KLHL42Q9P2K6 505 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 GGT3PA6NGU5 568 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 UGT2B7P16662 529 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 TPTEP56180 551 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 DCST2Q5T1A1 773 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 GALNT6Q8NCL4 622 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 NOP16Q9Y3C1 178 aaKnown RBP17.53■□□□□ 0.4
CLIP2-202ENST00000361545 PCDHGA7Q9Y5G6 932 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 MT-ND2P03891 347 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 MSX1P28360 303 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 ALG10Q5BKT4 473 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 LCN8Q6JVE9 175 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 DTWD1Q8N5C7 304 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 CYB561A3Q8NBI2 242 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 CASTOR1Q8WTX7 329 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 SPRYD4Q8WW59 207 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-202ENST00000361545 C3orf30Q96M34 536 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 SLC30A2Q9BRI3 323 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 PITHD1Q9GZP4 211 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-202ENST00000361545 ATG5Q9H1Y0 275 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 KLHL21Q9UJP4 597 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 SH3D21A4FU49 640 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 CHP2O43745 196 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 UBL4AP11441 157 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 GDF1P27539 372 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 HSD11B2P80365 405 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 POU4F2Q12837 409 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 PIGGQ5H8A4 983 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 BEND4Q6ZU67 534 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 KCTD9Q7L273 389 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 MEX3DQ86XN8 651 aaKnown RBP17.53■□□□□ 0.4
CLIP2-202ENST00000361545 DCBLD2Q96PD2 775 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 NUFIP1Q9UHK0 495 aaKnown RBP17.53■□□□□ 0.4
CLIP2-202ENST00000361545 SH2B3Q9UQQ2 575 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 YY2O15391 372 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 ADAP00813 363 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF35P13682 527 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF12P17014 697 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 ELP5Q8TE02 316 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 TBC1D20Q96BZ9 403 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 GMEB1Q9Y692 573 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 RAD51DO75771 328 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 HOXA9P31269 272 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 MMP12P39900 470 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 UNQ6126/PRO20091Q6UXV3 157 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 FTMTQ8N4E7 242 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 SLC5A7Q9GZV3 580 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 EMCNQ9ULC0 261 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 PCDHGB6Q9Y5F9 930 aa17.52■□□□□ 0.4
CLIP2-202ENST00000361545 OR2AT4A6NND4 320 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 SELENOWP63302 87 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 ZP2Q05996 745 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 NEDD4LQ96PU5 975 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 UBE2ZQ9H832 354 aaPredicted RBP17.52■□□□□ 0.39
CLIP2-202ENST00000361545 RNF215Q9Y6U7 377 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 TRIM64A6NGJ6 449 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 DHRS4L1P0CG22 281 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 CNR2P34972 360 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 DUSP6Q16828 381 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 C22orf42Q6IC83 251 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 ACOT12Q8WYK0 555 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 HDAC8Q9BY41 377 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 NMNAT1Q9HAN9 279 aaPredicted RBP17.52■□□□□ 0.39
CLIP2-202ENST00000361545 PCDHGA6Q9Y5G7 932 aa17.52■□□□□ 0.39
CLIP2-202ENST00000361545 NHSL1Q5SYE7 1610 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 SULT2B1O00204 365 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 PRKXP51817 358 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 SLC18B1Q6NT16 456 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 TLDC1Q6P9B6 456 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 TUBA3EQ6PEY2 450 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 XKR5Q6UX68 686 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 SYT14Q8NB59 555 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 INO80EQ8NBZ0 244 aaPredicted RBP17.51■□□□□ 0.39
CLIP2-202ENST00000361545 OR13H1Q8NG92 308 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 SUN5Q8TC36 379 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 TESCQ96BS2 214 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 TCTN2Q96GX1 697 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 MGLLQ99685 303 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 FN3KQ9H479 309 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 GPR83Q9NYM4 423 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 EXTL2Q9UBQ6 330 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 A0A1B0GTW7 788 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 C17orf113A0A1B0GUU1 675 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 ACTA2P62736 377 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 ACTG2P63267 376 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 SPHARQ15513 63 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 OR7A5Q15622 319 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 C19orf47Q8N9M1 422 aaKnown RBP17.51■□□□□ 0.39
CLIP2-202ENST00000361545 ARMC1Q9NVT9 282 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 PCDHA9Q9Y5H5 950 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 DISC1C4P0D8 188 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 MAS1P04201 325 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 TSC22D1Q15714 1073 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 ATAD3CQ5T2N8 411 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 NDUFB2O95178 105 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 MTNR1AP48039 350 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 EFR3AQ14156 821 aa17.51■□□□□ 0.39
CLIP2-202ENST00000361545 IL20RBQ6UXL0 311 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms