RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 F2RL3Q96RI0 385 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 LYSMD1Q96S90 227 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 VN1R3Q9BXE9 311 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 RBCK1Q9BYM8 510 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR2AG1Q9H205 316 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZCCHC4Q9H5U6 513 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 ESRP2Q9H6T0 727 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 PTTG3PQ9NZH4 202 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 KLHL42Q9P2K6 505 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 KIF25Q9UIL4 384 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 CASP8AP2Q9UKL3 1982 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 FEZF1A0PJY2 475 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 MFSD2BA6NFX1 497 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 NPIPB8E9PQR5 432 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 LYRM1O43325 122 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 SIGLEC6O43699 453 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 MMP20O60882 483 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 CFDP00746 253 aaPredicted RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 IL1AP01583 271 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 ELFN1P0C7U0 828 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 C1GALT1C1LP0DN25 315 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 LIMS1P48059 325 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 WNT4P56705 351 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 PCBP3P57721 371 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 WDR5P61964 334 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 FABP5Q01469 135 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 EEF1A2Q05639 463 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF791Q3KP31 576 aaPredicted RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 MEDAGQ5VYS4 303 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 BICRALQ6AI39 1079 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 IL20RBQ6UXL0 311 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 C6orf120Q7Z4R8 191 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 CAMKMTQ7Z624 323 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 JAZF1Q86VZ6 243 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 TMEM25Q86YD3 366 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR11H4Q8NGC9 324 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR52N1Q8NH53 320 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 TMEM169Q96HH4 297 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 TEFMQ96QE5 360 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 FOLH1BQ9HBA9 442 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZFP64Q9NPA5 681 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 SDHAF3Q9NRP4 125 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 CNIH4Q9P003 139 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 MBD2Q9UBB5 411 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 ASF1AQ9Y294 204 aa7.76□□□□□ -1.17
CDC42SE1-201ENST00000357235 CDH23Q9H251 3354 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 PQLC2LA1A4F0 135 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 TUBAL3A6NHL2 446 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 KPNA3O00505 521 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 SGCEO43556 437 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 CHP2O43745 196 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 PIPP12273 146 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 SELPP16109 830 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 UQCRC2P22695 453 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 MMP11P24347 488 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 BMP8BP34820 402 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 GIPRP48546 466 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 RAB13P51153 203 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 SNRPGP62308 76 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 RPL6Q02878 288 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 DSG2Q14126 1118 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 SWI5Q1ZZU3 235 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM71E1Q6IPT2 247 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 HTR3DQ70Z44 454 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 BMP8AQ7Z5Y6 402 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZER1Q7Z7L7 766 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 MARCH9Q86YJ5 346 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 DNAJC5GQ8N7S2 189 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR4F15Q8NGB8 312 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR8D4Q8NGM9 314 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR56A3Q8NH54 315 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 FIBINQ8TAL6 211 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 NEIL3Q8TAT5 605 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 ARL5BQ96KC2 179 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF582Q96NG8 517 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 TBX5Q99593 518 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 TREX2Q9BQ50 279 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 RSPO3Q9BXY4 272 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 REG4Q9BYZ8 158 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 PLA2G12AQ9BZM1 189 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 SPG21Q9NZD8 308 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 HCN3Q9P1Z3 774 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 CTSFQ9UBX1 484 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 NCKAP1Q9Y2A7 1128 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAAHO00519 579 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 GREM1O60565 184 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 HCN1O60741 890 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 ERAL1O75616 437 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 APOC3P02656 99 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 TCTN1Q2MV58 587 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 IDNKQ5T6J7 187 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 GAREM2Q75VX8 874 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 TECPR1Q7Z6L1 1165 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 TMEM145Q8NBT3 493 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 NANPQ8TBE9 248 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 UCN3Q969E3 161 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 GLYATL1Q969I3 302 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms