RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TMEM247A6NEH6 219 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 P04436 131 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 SP1P08047 785 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 ATP6V1C1P21283 382 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 RFX3P48380 749 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 KLRB1Q12918 225 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 GNA13Q14344 377 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 ARHGAP11BQ3KRB8 267 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 ZNF766Q5HY98 468 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 COX20Q5RI15 118 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 DCST2Q5T1A1 773 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 HEPHL1Q6MZM0 1159 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 HACD2Q6Y1H2 254 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 TRPM8Q7Z2W7 1104 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 MDGA2Q7Z553 956 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 ZNF227Q86WZ6 799 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 OR10G3Q8NGC4 313 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 OR8J3Q8NGG0 315 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 OR5M3Q8NGP4 307 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 RAB8BQ92930 207 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 PNPLA2Q96AD5 504 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 EFHD2Q96C19 240 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 HOPXQ9BPY8 73 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 SACM1LQ9NTJ5 587 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 KLF13Q9Y2Y9 288 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CSAG2Q9Y5P2 127 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CHCHD2Q9Y6H1 151 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 KCNE3Q9Y6H6 103 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 NUP214P35658 2090 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-201ENST00000356017 EPG5Q9HCE0 2579 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 C15orf38-AP3S2A0A0A6YYH1 394 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 ANKRD33BA6NCL7 494 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 UGT2B11O75310 529 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 STX11O75558 287 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 C1QCP02747 245 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 GUSBP08236 651 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 NUDT2P50583 147 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 DSTNP60981 165 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 GABPB1Q06547 395 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-201ENST00000356017 CAPRIN1Q14444 709 aaKnown RBP14.29□□□□□ -0.12
TRIM13-201ENST00000356017 TBCELQ5QJ74 424 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 NANOGP8Q6NSW7 305 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 TMEM81Q6P7N7 255 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 FIGNL1Q6PIW4 674 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 ARPINQ7Z6K5 226 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 SPPL2AQ8TCT8 520 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 HGDQ93099 445 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 SCMH1Q96GD3 660 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 TRNT1Q96Q11 434 aaKnown RBP14.29□□□□□ -0.12
TRIM13-201ENST00000356017 SDF2Q99470 211 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 CPPED1Q9BRF8 314 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-201ENST00000356017 NANOGQ9H9S0 305 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 SH2D2AQ9NP31 389 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 POLE3Q9NRF9 147 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 P2RX2Q9UBL9 471 aa14.29□□□□□ -0.12
TRIM13-201ENST00000356017 CACNA1GO43497 2377 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 KLRC4-KLRK1H3BQV0 150 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 FXYD1O00168 92 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 NME2P1O60361 137 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 ESRRAP11474 423 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-201ENST00000356017 BMP2P12643 396 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 ETFAP13804 333 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 NME2P22392 152 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 HPCAP84074 193 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 SNTA1Q13424 505 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 SLC6A19Q695T7 634 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 RPUSD3Q6P087 351 aaKnown RBP14.28□□□□□ -0.12
TRIM13-201ENST00000356017 FBXW8Q8N3Y1 598 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 FAM98AQ8NCA5 519 aaKnown RBP14.28□□□□□ -0.12
TRIM13-201ENST00000356017 NSL1Q96IY1 281 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 HOXD1Q9GZZ0 328 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 ARL8BQ9NVJ2 186 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 AP3M1Q9Y2T2 418 aa14.28□□□□□ -0.12
TRIM13-201ENST00000356017 IGKV1D-16P01601 117 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 CCL3P10147 92 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 NR2F1P10589 423 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 CYP4B1P13584 511 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 CNR1P21554 472 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 CLK3P49761 638 aaKnown RBP14.27□□□□□ -0.12
TRIM13-201ENST00000356017 MTPNP58546 118 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 INAQ16352 499 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 NADK2Q4G0N4 442 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 GPAT3Q53EU6 434 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 CCNJQ5T5M9 372 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 AP1ARQ63HQ0 302 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 METTL25Q8N6Q8 603 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 PMM1Q92871 262 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 ECSITQ9BQ95 431 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 SLC39A3Q9BRY0 314 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 ZNF350Q9GZX5 532 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 KAT8Q9H7Z6 458 aaKnown RBP14.27□□□□□ -0.12
TRIM13-201ENST00000356017 METTL7AQ9H8H3 244 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 HHATLQ9HCP6 504 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 KLHL1Q9NR64 748 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 UBQLN4Q9NRR5 601 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 NDE1Q9NXR1 346 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 CALML5Q9NZT1 146 aa14.27□□□□□ -0.12
TRIM13-201ENST00000356017 ABCG2Q9UNQ0 655 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms