RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CLDN22Q8N7P3 220 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 Q8N9G6 341 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 AVL9Q8NBF6 648 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 FZD3Q9NPG1 666 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 DNMT3AQ9Y6K1 912 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 MYH6P13533 1939 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 C11orf98E9PRG8 122 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RNASET2O00584 256 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SCAMP1O15126 338 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 UGDHO60701 494 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RPS17P08708 135 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 GAAP10253 952 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RPL17P18621 184 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF41P51814 821 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 TBPL1P62380 186 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 NXPE4Q6UWF7 544 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC9B2Q86UD5 537 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 TRAM1L1Q8N609 369 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 C16orf78Q8WTQ4 265 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 MICU1Q9BPX6 476 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SIAEQ9HAT2 523 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 TIMM8BQ9Y5J9 83 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 A8MVJ9 347 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 GRPRP30550 384 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 CBLL1Q75N03 491 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 IFNL1Q8IU54 200 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 CELF2-AS1Q8N7Q2 184 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 IL21RQ9HBE5 538 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 KLRF1Q9NZS2 232 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 A0A0D9SEW6 157 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 H3BUI4 141 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR7A17O14581 309 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ATG12O94817 140 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RAB40ALP0C0E4 278 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RAB3AP20336 220 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SP2Q02086 613 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 PDGFRLQ15198 375 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM107Q6UX40 140 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SSX9Q7RTT3 188 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 CADM3Q8N126 398 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RAB40AQ8WXH6 277 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 FRZBQ92765 325 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 MTHFD2LQ9H903 347 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 KCNK12Q9HB15 430 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 LUZP4Q9P127 313 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 YIPF1Q9Y548 306 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 EDDM13A0A1B0GTR0 161 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 SRPX2O60687 465 aaPredicted RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 IFNGR1P15260 489 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ACPPP15309 386 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 HNF1BP35680 557 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 RAB4BP61018 213 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 FAM189BP81408 668 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 RING1Q06587 406 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 NKPD1Q17RQ9 610 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 NHSL2Q5HYW2 709 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 GPR150Q8NGU9 434 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 APIPQ96GX9 242 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM68Q96MH6 324 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 LMF1Q96S06 567 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 BRF2Q9HAW0 419 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 C8AP07357 584 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 SGCBQ16585 318 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 RPL3LQ92901 407 aaKnown RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 FAM86C1Q9NVL1 165 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 PCDHA9Q9Y5H5 950 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 C3P01024 1663 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 SMIM18P0DKX4 95 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ADORA3P0DMS8 318 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 CSNK2A1P68400 391 aaPredicted RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 IL13RA1P78552 427 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ELOAQ14241 798 aaKnown RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 OXA1LQ15070 435 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ENTHD1Q8IYW4 607 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 NAXEQ8NCW5 288 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 CSNK2A3Q8NEV1 391 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 TSPAN10Q9H1Z9 355 aaPredicted RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 HRH4Q9H3N8 390 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 KCNS2Q9ULS6 477 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 SHOXO15266 292 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 LALBAP00709 142 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 TP53P04637 393 aaPredicted RBP12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 AWAT2Q6E213 333 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 FRMPD2BQ6IN97 320 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 MSLNLQ96KJ4 702 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ADAM10O14672 748 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 CASC3O15234 703 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms