RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SOX18P35713 384 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 KCNJ1P48048 391 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 HSPA13P48723 471 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PGGT1BP53609 377 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 ATP5J2P56134 94 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 ACTR3P61158 418 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 KRTAP1-1Q07627 177 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 FAM27E3Q08E93 113 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 CHD3Q12873 2000 aaKnown RBP10.19□□□□□ -0.78
RTN3-204ENST00000354497 TNK1Q13470 666 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 VEZF1Q14119 521 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PDK3Q15120 406 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 MOGQ16653 247 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TUSC1Q2TAM9 212 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TBCELQ5QJ74 424 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 ANKRD22Q5VYY1 191 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TMIGD1Q6UXZ0 262 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TMEM64Q6YI46 380 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PLEKHM3Q6ZWE6 761 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 YRDCQ86U90 279 aaKnown RBP10.19□□□□□ -0.78
RTN3-204ENST00000354497 KRT78Q8N1N4 520 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TTLQ8NG68 377 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 OR2L5Q8NG80 312 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TMEM171Q8WVE6 324 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 JADE3Q92613 823 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PTCD3Q96EY7 689 aaKnown RBP10.19□□□□□ -0.78
RTN3-204ENST00000354497 RILPQ96NA2 401 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TM9SF2Q99805 663 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TUBA1CQ9BQE3 449 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 ERP44Q9BS26 406 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 LGALS13Q9UHV8 139 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 HAO1Q9UJM8 370 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PACSIN3Q9UKS6 424 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 TMCC3Q9ULS5 477 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 CFL2Q9Y281 166 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 PCDHGA11Q9Y5H2 935 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 MXRA5Q9NR99 2828 aa10.19□□□□□ -0.78
RTN3-204ENST00000354497 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 A0A087X1B8 175 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 MAGEB16A2A368 324 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 SDR42E2A6NKP2 422 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 H0YJX3 145 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 PGRMC1O00264 195 aaKnown RBP10.18□□□□□ -0.78
RTN3-204ENST00000354497 ACOX3O15254 700 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 GUCY1B2O75343 617 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 WDR47O94967 919 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 F12P00748 615 aaPredicted RBP10.18□□□□□ -0.78
RTN3-204ENST00000354497 S100A6P06703 90 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 ENO2P09104 434 aaPredicted RBP10.18□□□□□ -0.78
RTN3-204ENST00000354497 ZNF23P17027 643 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 TAC1P20366 129 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 CPN2P22792 545 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 STT3AP46977 705 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 FBXW4P57775 412 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 TGM3Q08188 693 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 RIPPLY1Q0D2K3 151 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 GPS1Q13098 491 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 CCNG2Q16589 344 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 HEPHL1Q6MZM0 1159 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 ABHD17CQ6PCB6 329 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 RNF111Q6ZNA4 994 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 RFPL4BQ6ZWI9 263 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 TAGAPQ8N103 731 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 CENPSQ8N2Z9 138 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 MEIOBQ8N635 442 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 ZNF75CPQ92670 426 aaPredicted RBP10.18□□□□□ -0.78
RTN3-204ENST00000354497 PLEKHA8Q96JA3 519 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 ART5Q96L15 291 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 MAPKAP1Q9BPZ7 522 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 MRPL1Q9BYD6 325 aaKnown RBP10.18□□□□□ -0.78
RTN3-204ENST00000354497 TEX10Q9NXF1 929 aaPredicted RBP10.18□□□□□ -0.78
RTN3-204ENST00000354497 WIF1Q9Y5W5 379 aa10.18□□□□□ -0.78
RTN3-204ENST00000354497 TLN2Q9Y4G6 2542 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 A8MXE2 369 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 FGF17O60258 216 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 SH3BGRLO75368 114 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 CLEC3AO75596 197 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 RCBTB2O95199 551 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 CRYGSP22914 178 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 MC3RP41968 323 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 KCNJ5P48544 419 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 NAGLUP54802 743 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 GNG2P59768 71 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 HERVK_113P63132 956 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ERVK-8P63133 956 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 TAGLNQ01995 201 aaKnown RBP10.17□□□□□ -0.78
RTN3-204ENST00000354497 NTRK2Q16620 822 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 NHSL2Q5HYW2 709 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ADNP2Q6IQ32 1131 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 FAM122CQ6P4D5 195 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 DGAT2L6Q6ZPD8 337 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ZNF550Q7Z398 422 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 P4HA3Q7Z4N8 544 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 CNEP1R1Q8N9A8 125 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ZNF420Q8TAQ5 688 aaPredicted RBP10.17□□□□□ -0.78
RTN3-204ENST00000354497 ZPLD1Q8TCW7 415 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 C10orf82Q8WW14 230 aa10.17□□□□□ -0.78
RTN3-204ENST00000354497 ANKRD9Q96BM1 317 aaPredicted RBP10.17□□□□□ -0.78
RTN3-204ENST00000354497 NTNG2Q96CW9 530 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms