RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SCML1Q9UN30 329 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 ZNF443Q9Y2A4 671 aaPredicted RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 PLD2O14939 933 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 RGS5O15539 181 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 APOA1P02647 267 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 CPN2P22792 545 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TPTEP56180 551 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 CLDN2P57739 230 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 SUZ12Q15022 739 aaKnown RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TMEM44Q2T9K0 475 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 OR2G6Q5TZ20 316 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 FBXO42Q6P3S6 717 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 ENPP7Q6UWV6 458 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TMPRSS11AQ6ZMR5 421 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 DGLUCYQ7Z3D6 616 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 NKAIN4Q8IVV8 208 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 OSTF1Q92882 214 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TMCO6Q96DC7 493 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 OR2A5Q96R48 311 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 SF3B6Q9Y3B4 125 aaKnown RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TNFSF14O43557 240 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 NTN1O95631 604 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 THY1P04216 161 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 TSPAN19P0C672 248 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MAGP20916 626 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MAP4K2Q12851 820 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 PUS10Q3MIT2 529 aaKnown RBP20.68■□□□□ 0.9
UPF3A-201ENST00000351487 ANKRD54Q6NXT1 300 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 POGLUT1Q8NBL1 392 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 CDS1Q92903 461 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MCHR1Q99705 422 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MED18Q9BUE0 208 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MTHFD2LQ9H903 347 aaPredicted RBP20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MED17Q9NVC6 651 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 H3BQ06 376 aaPredicted RBP20.68■□□□□ 0.9
UPF3A-201ENST00000351487 CDRT1O95170 752 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 HOXB2P14652 356 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MLLT1Q03111 559 aaPredicted RBP20.68■□□□□ 0.9
UPF3A-201ENST00000351487 ARHGAP11BQ3KRB8 267 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 TYW3Q6IPR3 259 aaKnown RBP20.68■□□□□ 0.9
UPF3A-201ENST00000351487 GDF7Q7Z4P5 450 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 LAX1Q8IWV1 398 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 ZNF485Q8NCK3 441 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 OR4K14Q8NGD5 310 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 OR4Q3Q8NH05 313 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 SLC41A3Q96GZ6 507 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 MSLNLQ96KJ4 702 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 WDR92Q96MX6 357 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 OR2A14Q96R47 310 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 C14orf119Q9NWQ9 140 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 PTGFRNQ9P2B2 879 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 TBC1D24Q9ULP9 559 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 CMAHPQ9Y471 501 aa20.68■□□□□ 0.9
UPF3A-201ENST00000351487 A6NCN8 305 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 SURF4O15260 269 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 LINC01565O15544 149 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 APOL3O95236 402 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 MSL3P1P0C860 447 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 LIMS3P0CW19 117 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 LIMS4P0CW20 117 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 GNSP15586 552 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 ZNF79Q15937 498 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 AADACL4Q5VUY2 407 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 ZNF620Q6ZNG0 422 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 MBOAT2Q6ZWT7 520 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 AKAP14Q86UN6 197 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 PEX5LQ8IYB4 626 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 FAM181AQ8N9Y4 354 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 RFKQ969G6 155 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 ARHGAP9Q9BRR9 750 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 DAPP1Q9UN19 280 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 WDR45Q9Y484 360 aa20.67■□□□□ 0.9
UPF3A-201ENST00000351487 P2RX6O15547 441 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 CDH11P55287 796 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 HOXC5Q00444 222 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 CLEC12AQ5QGZ9 265 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 ZNF836Q6ZNA1 936 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 USP53Q70EK8 1073 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 KCTD7Q96MP8 289 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 PBX4Q9BYU1 374 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 NTNG1Q9Y2I2 539 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 FANCMQ8IYD8 2048 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 CTSVO60911 334 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 GABRA5P31644 462 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 PBX2P40425 430 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 C22orf42Q6IC83 251 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 SLC30A6Q6NXT4 461 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 QSOX2Q6ZRP7 698 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 NRMQ8IXM6 262 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 CCL4L1Q8NHW4 92 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 UFD1Q92890 307 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 COL26A1Q96A83 441 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 TEX12Q9BXU0 123 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 SRRQ9GZT4 340 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 MCOLN1Q9GZU1 580 aa20.66■□□□□ 0.9
UPF3A-201ENST00000351487 URADA6NGE7 173 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 SLC30A4O14863 429 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 B3GALT2O43825 422 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 THBS1P07996 1170 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 SOX18P35713 384 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms