RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MROH8Q9H579 483 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM38AQ9H6F2 299 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CACYBPQ9HB71 228 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CXXC1Q9P0U4 656 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 MRTO4Q9UKD2 239 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 DLGAP4Q9Y2H0 992 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 KCTD3Q9Y597 815 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 DMRT1Q9Y5R6 373 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 OR2M5A3KFT3 312 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SMIM30A4D0T7 59 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 FAM86C2PA6NEL3 165 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 OR6C75A6NL08 312 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 DBX1A6NMT0 343 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 POM121CA8CG34 1229 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 NEDD8-MDP1E9PL57 170 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 AGRPO00253 132 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PPEF2O14830 753 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 TO15178 435 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 LANCL1O43813 399 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 FZD7O75084 574 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 NIPSNAP2O75323 286 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CDC123O75794 336 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 KRT33AO76009 404 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CPSF4O95639 269 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PAK4O96013 591 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 GASTP01350 101 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 IGLV3-25P01717 112 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 IL5P05113 134 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 IQCF3P0C7M6 154 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CD53P19397 219 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 HTR2AP28223 471 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 DGKGP49619 791 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 RABGGTBP53611 331 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 DLX5P56178 289 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ECH1Q13011 328 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SNTB2Q13425 540 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SCARB2Q14108 478 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SMCO1Q147U7 214 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SPDYE7PQ495Y7 208 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SGO1Q5FBB7 561 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CRB2Q5IJ48 1285 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF770Q6IQ21 691 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 TRIM40Q6P9F5 258 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 TMIGD1Q6UXZ0 262 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 LINGO4Q6UY18 593 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 LRRC70Q7Z2Q7 622 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SIAH3Q8IW03 269 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 NPAS3Q8IXF0 933 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 TCEANCQ8N8B7 351 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SAMD12Q8N8I0 201 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 WDSUB1Q8N9V3 476 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 FAM98AQ8NCA5 519 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CHST13Q8NET6 341 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 OR10K1Q8NGX5 313 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 HUS1BQ8NHY5 278 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 GTF3C2Q8WUA4 911 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 LPPQ93052 612 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 RFKQ969G6 155 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CXorf40BQ96DE9 158 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 POLR2J3Q9H1A7 115 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CDCP1Q9H5V8 836 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 NSUN3Q9H649 340 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 RDH14Q9HBH5 336 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 TCF7L1Q9HCS4 588 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PRMT8Q9NR22 394 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 NANSQ9NR45 359 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 GULP1Q9UBP9 304 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 MIOXQ9UGB7 285 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 KLF15Q9UIH9 416 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 YARS2Q9Y2Z4 477 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 DHRS7Q9Y394 339 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CHST2Q9Y4C5 530 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 LTBP2Q14767 1821 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SCN1AP35498 2009 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 LCTP09848 1927 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 A0A1B0GTQ1 180 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 GABRR3A8MPY1 467 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 HOXA2O43364 376 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 PAGE1O75459 146 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 KHDRBS3O75525 346 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 C22orf31O95567 290 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 PEX11BO96011 259 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SERPIND1P05546 499 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 USP17L7P0C7H9 530 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SAGP10523 405 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 MGMTP16455 207 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 RHOQP17081 205 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 PSMB1P20618 241 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CNR1P21554 472 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 DGKAP23743 735 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ATP5A1P25705 553 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 AQP1P29972 269 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 AGTR1P30556 359 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SPAM1P38567 509 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SMSP52788 366 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CRYBA2P53672 197 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 EEF1A1P68104 462 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 DCDP81605 110 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 DEFA6Q01524 100 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 EEF1A2Q05639 463 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms