RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ALAS2P22557 587 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 GSTT1P30711 240 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 OR1D4P47884 311 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 EMDP50402 254 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 CRISP1P54107 249 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 RP1P56715 2156 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 EEF1A1P68104 462 aaKnown RBP18.6■□□□□ 0.57
RTN1-202ENST00000342503 HOXC5Q00444 222 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 RAB39AQ14964 217 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 PTGES3Q15185 160 aaKnown RBP18.6■□□□□ 0.57
RTN1-202ENST00000342503 NR0B2Q15466 257 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 MAPK14Q16539 360 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 PROX2Q3B8N5 592 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 PRAMEF17Q5VTA0 474 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 C1orf210Q8IVY1 113 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.6■□□□□ 0.57
RTN1-202ENST00000342503 NR4A3Q92570 626 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 EDAQ92838 391 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 NECAB3Q96P71 396 aaPredicted RBP18.6■□□□□ 0.57
RTN1-202ENST00000342503 LMF2Q9BU23 707 aaKnown RBP18.6■□□□□ 0.57
RTN1-202ENST00000342503 YIPF2Q9BWQ6 316 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 DGCR6LQ9BY27 220 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 COL6A3P12111 3177 aa18.6■□□□□ 0.57
RTN1-202ENST00000342503 LAMA1P25391 3075 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 NPIPA5A0A0B4J1W7 369 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 NPIPA7E9PJI5 369 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 KIAA0513O60268 411 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 DBIP07108 87 aaKnown RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 CCNYL3P0C7X3 344 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 NPIPA8P0DM63 369 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 CHMP24386 653 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 TRHRP34981 398 aaPredicted RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 KRT20P35900 424 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 GCGRP47871 477 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 IDH2P48735 452 aaKnown RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 RGS8P57771 180 aaPredicted RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 ZNF267Q14586 743 aaPredicted RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 XAF1Q6GPH4 301 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 ZC3H14Q6PJT7 736 aaKnown RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 KMT5CQ86Y97 462 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 MORN4Q8NDC4 146 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 OR4C6Q8NH72 309 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 NODALQ96S42 347 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 SEMA4GQ9NTN9 838 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 SCN3BQ9NY72 215 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 ZNF226Q9NYT6 803 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 ERVK-18Q9QC07 812 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 DHCR7Q9UBM7 475 aaKnown RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 RSL24D1Q9UHA3 163 aaKnown RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 KCNE5Q9UJ90 142 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 NTNG1Q9Y2I2 539 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 HEMK1Q9Y5R4 338 aaPredicted RBP18.59■□□□□ 0.57
RTN1-202ENST00000342503 SNX5Q9Y5X3 404 aa18.59■□□□□ 0.57
RTN1-202ENST00000342503 LY6G6EA0A0G2JKS1 128 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 CPED1A4D0V7 1026 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 ZAR1LA6NP61 321 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 FAM20BO75063 409 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 OSMP13725 252 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 PNLIPP16233 465 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.57
RTN1-202ENST00000342503 TMEM236Q5W0B7 351 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 GUSBP11Q6P575 273 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 LINC00471Q8N535 108 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 OR4K5Q8NGD3 323 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 MCHR1Q99705 422 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 DUSP21Q9H596 190 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 ZNF768Q9H5H4 540 aaKnown RBP18.58■□□□□ 0.57
RTN1-202ENST00000342503 VCX3AQ9NNX9 186 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 LANCL2Q9NS86 450 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 ATXN7L1Q9ULK2 861 aaPredicted RBP18.58■□□□□ 0.57
RTN1-202ENST00000342503 U3KQA8 63 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 NUP210LQ5VU65 1888 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 CABIN1Q9Y6J0 2220 aa18.58■□□□□ 0.57
RTN1-202ENST00000342503 PEX12O00623 359 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 AP3D1O14617 1153 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 SIGLEC6O43699 453 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 CYP7B1O75881 506 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 KCNK2O95069 426 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 IFNA16P05015 189 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 CFIP05156 583 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 POU1F1P28069 291 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 PSG6Q00889 435 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 TRAM2Q15035 370 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 ZNHIT3Q15649 155 aaPredicted RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 EIPR1Q53HC9 387 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 ENTPD8Q5MY95 495 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 PERM1Q5SV97 790 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 CLVS1Q8IUQ0 354 aaPredicted RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 DEPDC4Q8N2C3 294 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 RHOXF1Q8NHV9 184 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 DIO2Q92813 273 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 MVB12AQ96EY5 273 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 TUBA1CQ9BQE3 449 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 CNPPD1Q9BV87 410 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 CCDC90BQ9GZT6 254 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 ERVK-19Q9WJR5 959 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 DTX4Q9Y2E6 619 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 BRINP1O60477 761 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 IGFBP1P08833 259 aaPredicted RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 RNF144AP50876 292 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms