RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GVINP1Q7Z2Y8 2422 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 JRKO75564 520 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 CKMT1AP12532 417 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 AZGP1P25311 298 aaKnown RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 KIR2DL1P43626 348 aaPredicted RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 ARFIP1P53367 373 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 RPS3AP61247 264 aaKnown RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 MMP21Q8N119 569 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 CEP76Q8TAP6 659 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 KCTD7Q96MP8 289 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 TRNT1Q96Q11 434 aaKnown RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 OR6C1Q96RD1 312 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 GDF15Q99988 308 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDX54-202ENST00000314045 SPNS1Q9H2V7 528 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 TCEAL2Q9H3H9 227 aaPredicted RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 CDC14CA4D256 554 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 AGAP14A8MT82 685 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 KCNJ10P78508 379 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 SLC3A1Q07837 685 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 GAB1Q13480 694 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 TUBA3CQ13748 450 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 TAB1Q15750 504 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 GFOD2Q3B7J2 385 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 LRIF1Q5T3J3 769 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 IQCF1Q8N6M8 205 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 ADAMTS16Q8TE57 1224 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 TFAP2CQ92754 450 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 PRRC1Q96M27 445 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 ELF4Q99607 663 aaPredicted RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 QRSL1Q9H0R6 528 aaKnown RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 ZNF696Q9H7X3 374 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 DDX31Q9H8H2 851 aaKnown RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 PLEKHA1Q9HB21 404 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 TCF7L1Q9HCS4 588 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 MRPL3P09001 348 aaKnown RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 NR2C1P13056 603 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 DCKP27707 260 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 MAP2K4P45985 399 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 ERI1Q8IV48 349 aaKnown RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 BAHD1Q8TBE0 780 aaPredicted RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 C12orf43Q96C57 262 aaKnown RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 SECISBP2Q96T21 854 aaKnown RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 KCNS3Q9BQ31 491 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 TMPRSS11EQ9UL52 423 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 EPOPA6NHQ4 379 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 EFCAB7A8K855 629 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 CTNSO60931 367 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 HLA-DPB1P04440 258 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 MNDAP41218 407 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 STAT5AP42229 794 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 LHFPL3Q86UP9 236 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 YIPF7Q8N8F6 280 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 ASB15Q8WXK1 588 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 COQ8BQ96D53 544 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 COX4I2Q96KJ9 171 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 TMEM9Q9P0T7 183 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 CBLCQ9ULV8 474 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 RNF6Q9Y252 685 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 MYOFQ9NZM1 2061 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 NCOR1O75376 2440 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 LOC105369274A0A096LPK9 316 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 LOC102723532A0A0G2JNH3 316 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 A0A1W2PPW3 197 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 VSTM2BA6NLU5 285 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 FXYD1O00168 92 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 PROM1O43490 865 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 ASNA1O43681 348 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 RAB36O95755 333 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 CELP19835 753 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 EDNRAP25101 427 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 FOLR3P41439 243 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 BNIP3Q12983 259 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 PDSS1Q5T2R2 415 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 KRT74Q7RTS7 529 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 OR4N4Q8N0Y3 316 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 DNAJA4Q8WW22 397 aaPredicted RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 DPH1Q9BZG8 443 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 ETAA1Q9NY74 926 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 CLEC1BQ9P126 229 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 COMMD3Q9UBI1 195 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 MBD1Q9UIS9 605 aaPredicted RBP12.82□□□□□ -0.36
DDX54-202ENST00000314045 SLC6A14Q9UN76 642 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 SPTA1P02549 2419 aa12.82□□□□□ -0.36
DDX54-202ENST00000314045 LMO7DNF2Z398 122 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 TMX2-CTNND1H3BSU7 103 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 SLITRK5O94991 958 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 PAPLNO95428 1278 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 SERPINA3P01011 423 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 SLC35E2P0CK97 266 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 LIM2P55344 173 aa12.81□□□□□ -0.36
DDX54-202ENST00000314045 ELOAQ14241 798 aaKnown RBP12.81□□□□□ -0.36
DDX54-202ENST00000314045 COL13A1Q5TAT6 717 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms