RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 OR4K5Q8NGD3 323 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF420Q8TAQ5 688 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 GAB3Q8WWW8 586 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF226Q9NYT6 803 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 CDC14AQ9UNH5 594 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 CENPVL1A0A0U1RR11 272 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 GXYLT2A0PJZ3 443 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 CLDN24A6NM45 220 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF749O43361 778 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 LAMTOR5O43504 91 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 CYP7B1O75881 506 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 DBIP07108 87 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 MAOAP21397 527 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 RPS4Y1P22090 263 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 TRHRP34981 398 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 STT3AP46977 705 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ILKQ13418 452 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 MAPK14Q16539 360 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 TMEM236Q5W0B7 351 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 FIGNL1Q6PIW4 674 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 TTLL10Q6ZVT0 673 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 KANSL1Q7Z3B3 1105 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 GATAD2AQ86YP4 633 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ERI1Q8IV48 349 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 OR13F1Q8NGS4 319 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 DIO2Q92813 273 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 SLC41A2Q96JW4 573 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 CNDP2Q96KP4 475 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 LMF2Q9BU23 707 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 SEMA4GQ9NTN9 838 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 MAU2Q9Y6X3 613 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 A0A1B0GTQ1 180 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 CPSF4LA6NMK7 179 aaKnown RBP19.77■□□□□ 0.76
ATG4D-201ENST00000309469 A8MU76 341 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 AP3D1O14617 1153 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 KIAA0513O60268 411 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 GABRB1P18505 474 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 DCKP27707 260 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 POU1F1P28069 291 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 IFNA8P32881 189 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 EMDP50402 254 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 CDC42P60953 191 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 SIGLEC14Q08ET2 396 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 EIPR1Q53HC9 387 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 GPR107Q5VW38 600 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 PRSS42Q7Z5A4 293 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 ZER1Q7Z7L7 766 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 OR1L3Q8NH93 324 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 PMM1Q92871 262 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 SLC38A4Q969I6 547 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 CCDC74AQ96AQ1 378 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 DUSP23Q9BVJ7 150 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 POLR2J3Q9H1A7 115 aaKnown RBP19.77■□□□□ 0.76
ATG4D-201ENST00000309469 FOLH1BQ9HBA9 442 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 CAPN10Q9HC96 672 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 POLE3Q9NRF9 147 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 IMPAD1Q9NX62 359 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 PCDHGB1Q9Y5G3 927 aa19.77■□□□□ 0.76
ATG4D-201ENST00000309469 TP53BP1Q12888 1972 aaPredicted RBP19.77■□□□□ 0.75
ATG4D-201ENST00000309469 SCN2AQ99250 2005 aa19.77■□□□□ 0.75
ATG4D-201ENST00000309469 HRKO00198 91 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 SEC14L2O76054 403 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 FOLR1P15328 257 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 PCMT1P22061 227 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ALAS2P22557 587 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 SSTR4P31391 388 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 HOXC5Q00444 222 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 TEKQ02763 1124 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 CSTF1Q05048 431 aaKnown RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ST3GAL3Q11203 375 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 COX10Q12887 443 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 TUBA3CQ13748 450 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF267Q14586 743 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 TRAM2Q15035 370 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ZNHIT3Q15649 155 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 PLK5Q496M5 336 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ENTPD8Q5MY95 495 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 GTF2IRD2BQ6EKJ0 949 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 CD300LDQ6UXZ3 194 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 GTF2IRD2Q86UP8 949 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 KMT5CQ86Y97 462 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 CCDC103Q8IW40 242 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 IPCEF1Q8WWN9 437 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 C12orf43Q96C57 262 aaKnown RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 MCHR1Q99705 422 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 LHPPQ9H008 270 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 CCNB1IP1Q9NPC3 277 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 PLCXD1Q9NUJ7 323 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 KCNE5Q9UJ90 142 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 HEMK1Q9Y5R4 338 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 BRINP1O60477 761 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 MRPS14O60783 128 aaKnown RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ITIH1P19827 911 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 MMP11P24347 488 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 LSM11P83369 360 aaKnown RBP eCLIP19.76■□□□□ 0.752e-15■□□□□ 8.5
ATG4D-201ENST00000309469 PSG6Q00889 435 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 EMX1Q04741 257 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 AP1ARQ63HQ0 302 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 C1orf94Q6P1W5 598 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 FKBP10Q96AY3 582 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms