RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SLC2A10O95528 541 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 FGBP02675 491 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 ACP2P11117 423 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 ACADMP11310 421 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 ANXA11P50995 505 aaKnown RBP15.34■□□□□ 0.05
GPC1-201ENST00000264039 FRRS1Q6ZNA5 592 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 LRRTM4Q86VH4 590 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 ADGRG3Q86Y34 549 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 C10orf53Q8N6V4 93 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 MNTQ99583 582 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 ALG8Q9BVK2 526 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 SYNPO2LQ9H987 977 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 NOX3Q9HBY0 568 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 FTSJ1Q9UET6 329 aa15.34■□□□□ 0.05
GPC1-201ENST00000264039 SSR2P43308 183 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 SORDQ00796 357 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 DSC1Q08554 894 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 TCTN3Q6NUS6 607 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 SFXN4Q6P4A7 337 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 CDK20Q8IZL9 346 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 STPG2Q8N412 459 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 BBS1Q8NFJ9 593 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 THAP6Q8TBB0 222 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 TRIB3Q96RU7 358 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 NIT2Q9NQR4 276 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 PLEKHA6Q9Y2H5 1048 aa15.33■□□□□ 0.05
GPC1-201ENST00000264039 F8W036 122 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 HOXD4P09016 255 aaPredicted RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 NPR2P20594 1047 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 GRPRP30550 384 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 OMPP47874 163 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 BLOC1S1P78537 153 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 RAB40BQ12829 278 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 GK2Q14410 553 aaPredicted RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 LYPLAL1Q5VWZ2 237 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 ZER1Q7Z7L7 766 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 DDX53Q86TM3 631 aaKnown RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 NRMQ8IXM6 262 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 FAM98AQ8NCA5 519 aaKnown RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 OR6K6Q8NGW6 343 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 OR56B4Q8NH76 319 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 ISG20L2Q9H9L3 353 aaKnown RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 TTLL8A6PVC2 850 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 CXCL11O14625 94 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 SERPINA3P01011 423 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 OR1D2P34982 312 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 RPL3P39023 403 aaKnown RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 ARFIP1P53367 373 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 BTG1P62324 171 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 ZNF311Q5JNZ3 666 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 PIP5KL1Q5T9C9 394 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 TMEM220Q6QAJ8 160 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 ZNF687Q8N1G0 1237 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 LINC01465Q8N7H1 131 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 OR52B4Q8NGK2 314 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 ADAMTS14Q8WXS8 1223 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 C3orf49Q96BT1 292 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 TOE1Q96GM8 510 aaKnown RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 SAMD8Q96LT4 415 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 SEMA4CQ9C0C4 833 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 P2RY12Q9H244 342 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 DLL4Q9NR61 685 aa15.33■□□□□ 0.04
GPC1-201ENST00000264039 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
GPC1-201ENST00000264039 CACNA1IQ9P0X4 2223 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 WASH4PA8MWX3 477 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 NTN1O95631 604 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 APEHP13798 732 aaKnown RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 ATP1B2P14415 290 aaPredicted RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 RAD52P43351 418 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 ZNF273Q14593 569 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 GPR33Q49SQ1 333 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 MPPE1Q53F39 396 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 METAP1DQ6UB28 335 aaPredicted RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 GSG1LQ6UXU4 331 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 QSOX2Q6ZRP7 698 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.041e-8■■■■■ 35.8
GPC1-201ENST00000264039 SIGLEC11Q96RL6 698 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 MICU1Q9BPX6 476 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 TAPBPLQ9BX59 468 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 PLA2G12AQ9BZM1 189 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 PPP1R3EQ9H7J1 279 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 KANTRA0A1W2PQU2 76 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 METTL21EPA6NDL7 271 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 OR5K3A6NET4 321 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 F5H0A9 414 aaPredicted RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 AGPAT2O15120 278 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 TSPAN6O43657 245 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 SSX5O60225 188 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 IGLV3-25P01717 112 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 SLC6A1P30531 599 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 GJA5P36382 358 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 AP1S2P56377 157 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 AP3S2P59780 193 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 ZNF280AP59817 542 aaPredicted RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 PUM1Q14671 1186 aaKnown RBP eCLIP15.32■□□□□ 0.04
GPC1-201ENST00000264039 MELKQ14680 651 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 SLC25A35Q3KQZ1 300 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 CCDC36Q8IYA8 594 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 C16orf78Q8WTQ4 265 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 BCL7CQ8WUZ0 217 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms