RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 AGAP5A6NIR3 686 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 ADAMDEC1O15204 470 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 ALOX12BO75342 701 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 KLK3P07288 261 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 RHCEP18577 417 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 FPR1P21462 350 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 RRM2P31350 389 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 DAG1Q14118 895 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 OTUD3Q5T2D3 398 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 FAM198BQ6UWH4 519 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 LACC1Q8IV20 430 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 PEX5LQ8IYB4 626 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 MORN4Q8NDC4 146 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 OR4N2Q8NGD1 307 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 SDCCAG3Q96C92 435 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 NRBF2Q96F24 287 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 EPYCQ99645 322 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 PIP5K1AQ99755 562 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 NUDT9Q9BW91 350 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 TRIM45Q9H8W5 580 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 Q9N2J8 555 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 CFL2Q9Y281 166 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF443Q9Y2A4 671 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 CCDC88CQ9P219 2028 aa21.22■□□□□ 0.99
SMARCB1-201ENST00000263121 J3KTA2 159 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 HPRP00739 348 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 THBS1P07996 1170 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 ALDH3A2P51648 485 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 EMP2P54851 167 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 PPP2R2BQ00005 443 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 GPR68Q15743 365 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 FAAH2Q6GMR7 532 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 DHRS13Q6UX07 377 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 ZPBPQ9BS86 351 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 GABARAPL1Q9H0R8 117 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 USE1Q9NZ43 259 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 C3orf18Q9UK00 162 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 NXT1Q9UKK6 140 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 SLC9A8Q9Y2E8 581 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 TESMINQ9Y4I5 508 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 CENPVL1A0A0U1RR11 272 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 SEMA7AO75326 666 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 IGKV1D-16P01601 117 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 ALPLP05186 524 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 SLC5A2P31639 672 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 PIGAP37287 484 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 YAP1P46937 504 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 TCTN3Q6NUS6 607 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 ZAR1Q86SH2 424 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 RBM45Q8IUH3 476 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 OR1N1Q8NGS0 311 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 VANGL1Q8TAA9 524 aaPredicted RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 MAGEE2Q8TD90 523 aaPredicted RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 MR1Q95460 341 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 DEPDC7Q96QD5 511 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 BARD1Q99728 777 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 ARHGDIGQ99819 225 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 DDA1Q9BW61 102 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 OSBPL10Q9BXB5 764 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 KCNE5Q9UJ90 142 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 KCND3Q9UK17 655 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 FAM32AQ9Y421 112 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 LYVE1Q9Y5Y7 322 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 AP4B1Q9Y6B7 739 aa21.21■□□□□ 0.99
SMARCB1-201ENST00000263121 PMS2P1A4D2B8 440 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 M0R3H8 397 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 PPICP45877 212 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 MAPK14Q16539 360 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 NHSL2Q5HYW2 709 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 FAM199XQ6PEV8 388 aaPredicted RBP21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 OR4C15Q8NGM1 316 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 METTL21AQ8WXB1 218 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 TAAR9Q96RI9 348 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 CRB3Q9BUF7 120 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 OSBPL11Q9BXB4 747 aa21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 CACYBPQ9HB71 228 aaKnown RBP21.2■□□□□ 0.98
SMARCB1-201ENST00000263121 CCDC187A0A096LP49 1063 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 FFAR1O14842 300 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 DBIP07108 87 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 CDK4P11802 303 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 GPR143P51810 404 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 ARHGDIAP52565 204 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 EEF1A1P68104 462 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 SPIBQ01892 262 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 LARS2Q15031 903 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 HES3Q5TGS1 186 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 TMEM205Q6UW68 189 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 ZNF836Q6ZNA1 936 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 SLCO6A1Q86UG4 719 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 GALNT6Q8NCL4 622 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 ADIPOR1Q96A54 375 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 RBM4BQ9BQ04 359 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 RBM4Q9BWF3 364 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 SMPD3Q9NY59 655 aaPredicted RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 COPS7AQ9UBW8 275 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 PISDQ9UG56 409 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 GPN3Q9UHW5 284 aaPredicted RBP21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 ACAD8Q9UKU7 415 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 CBLCQ9ULV8 474 aa21.19■□□□□ 0.98
SMARCB1-201ENST00000263121 ZNF232Q9UNY5 417 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms