RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 SPSB2Q99619 263 aa13.38□□□□□ -0.27
SCARF1-201ENST00000263071 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
SCARF1-201ENST00000263071 B4GALT6Q9UBX8 382 aa13.38□□□□□ -0.27
SCARF1-201ENST00000263071 IL20RAQ9UHF4 553 aa13.38□□□□□ -0.27
SCARF1-201ENST00000263071 MRTO4Q9UKD2 239 aaKnown RBP13.38□□□□□ -0.27
SCARF1-201ENST00000263071 CLEC4AQ9UMR7 237 aa13.38□□□□□ -0.27
SCARF1-201ENST00000263071 SLC16A8O95907 504 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 IGSF6O95976 241 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 KLK1P06870 262 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 PRPS2P11908 318 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 NR2C1P13056 603 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 NDUFB7P17568 137 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 PRPS1L1P21108 318 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 SDC2P34741 201 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 SPCS3P61009 180 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 RNF212Q495C1 297 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 DNAJB7Q7Z6W7 309 aaPredicted RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 TRAPPC5Q8IUR0 188 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 MCATQ8IVS2 390 aaKnown RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF740Q8NDX6 193 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 SNX33Q8WV41 574 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 APH1BQ8WW43 257 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 ZC3H10Q96K80 434 aaKnown RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 IL17FQ96PD4 163 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 TRPC4Q9UBN4 977 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 CCDC88CQ9P219 2028 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 PDHA2P29803 388 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 RING1Q06587 406 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 CNTN1Q12860 1018 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 RAB33AQ14088 237 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 TMEM44Q2T9K0 475 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 THOC6Q86W42 341 aaKnown RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 DNAJC22Q8N4W6 341 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 TRMT10AQ8TBZ6 339 aaKnown RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 TAS2R3Q9NYW6 316 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF624Q9P2J8 865 aaPredicted RBP13.37□□□□□ -0.27
SCARF1-201ENST00000263071 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 CDH10Q9Y6N8 788 aa13.37□□□□□ -0.27
SCARF1-201ENST00000263071 RANBP2P49792 3224 aaKnown RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 AOC2O75106 756 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CH25HO95992 272 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 GALTP07902 379 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 POU3F2P20265 443 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 AOAHP28039 575 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 HBA1P69905 142 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 SLC9B2Q86UD5 537 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 C1GALT1C1Q96EU7 318 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 TMEM43Q9BTV4 400 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 C1QTNF3Q9BXJ4 246 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 SCP2D1Q9UJQ7 156 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 PCDHGB7Q9Y5F8 929 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 IQCMA0A1B0GVH7 501 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 FAM170BA6NMN3 283 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 GAPDHSO14556 408 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 SEPT4O43236 478 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 BTG1P62324 171 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 COTL1Q14019 142 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 SCARB2Q14108 478 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CLEC12AQ5QGZ9 265 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 ZCCHC12Q6PEW1 402 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CNIH2Q6PI25 160 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 NKAIN4Q8IVV8 208 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 PRR14Q9BWN1 585 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 MIXL1Q9H2W2 232 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 YARS2Q9Y2Z4 477 aaKnown RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 OTOFQ9HC10 1997 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 TSC2P49815 1807 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 GLOD5A6NK44 160 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 ANXA2P2A6NMY6 339 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 PRR23D1E9PI22 279 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 TSPAN6O43657 245 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 ADAMTS4O75173 837 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 ALDOBP05062 364 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CRYBA1P05813 215 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 PRR23D2P0DMB1 279 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 TAS2R50P59544 299 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 LMAN2Q12907 356 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CBLN2Q8IUK8 224 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 HUS1BQ8NHY5 278 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 DOK4Q8TEW6 326 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 POLR2J2Q9GZM3 115 aaKnown RBP13.36□□□□□ -0.27
SCARF1-201ENST00000263071 MED9Q9NWA0 146 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 MARCH5Q9NX47 278 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 POMT2Q9UKY4 750 aa13.36□□□□□ -0.27
SCARF1-201ENST00000263071 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 A0A1W2PRU2 124 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 TRBC2A0A5B9 178 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF879B4DU55 563 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 CD22P20273 847 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 BMP8BP34820 402 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms