RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 DBIP07108 87 aaKnown RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 THRBP10828 461 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 TRHRP34981 398 aaPredicted RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 TSPAN7P41732 249 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 SMIM11AP58511 58 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 EIPR1Q53HC9 387 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 NHSL2Q5HYW2 709 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 FAAH2Q6GMR7 532 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 TSEN54Q7Z6J9 526 aaKnown RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 TAGAPQ8N103 731 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 PHF10Q8WUB8 498 aaKnown RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 APOBEC4Q8WW27 367 aaKnown RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 CYGBQ8WWM9 190 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 ZG16BQ96DA0 208 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 SLC46A1Q96NT5 459 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 NR1H4Q96RI1 486 aaPredicted RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 G6PC3Q9BUM1 346 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 ADI1Q9BV57 179 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 ULBP3Q9BZM4 244 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 SAP130Q9H0E3 1048 aa17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 SOX17Q9H6I2 414 aaPredicted RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 ZNF443Q9Y2A4 671 aaPredicted RBP17.39■□□□□ 0.37
TNFSF9-201ENST00000245817 BRINP1O60477 761 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 IFNA8P32881 189 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 RAD23AP54725 363 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 GANABQ14697 944 aaKnown RBP17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 PDK3Q15120 406 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 RFX4Q33E94 735 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 FLYWCH1Q4VC44 716 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 LIN52Q52LA3 116 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 ZNF385CQ66K41 422 aaPredicted RBP17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 ATG16L2Q8NAA4 619 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 OR52J3Q8NH60 311 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 GABARAPL1Q9H0R8 117 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 C3orf18Q9UK00 162 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 LYVE1Q9Y5Y7 322 aa17.38■□□□□ 0.37
TNFSF9-201ENST00000245817 AGAP5A6NIR3 686 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 IDSB3KWA1 339 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 M0R3H8 397 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 KIAA0513O60268 411 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 ZIC2O95409 532 aaPredicted RBP17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 THBS1P07996 1170 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 EMP2P54851 167 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 SLC37A1P57057 533 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 RAB15P59190 212 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 PPP2R2BQ00005 443 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 LAPTM4AQ15012 233 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 COLEC12Q5KU26 742 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 DCAF12Q5T6F0 453 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 HLA-DQA1Q5Y7H0 255 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 MARVELD2Q8N4S9 558 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 GIPC3Q8TF64 312 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 TFAP2CQ92754 450 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 ITPAQ9BY32 194 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 TMCC3Q9ULS5 477 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 CBLCQ9ULV8 474 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 DTX4Q9Y2E6 619 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 LOXL2Q9Y4K0 774 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 ZNF292O60281 2723 aa17.37■□□□□ 0.37
TNFSF9-201ENST00000245817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 ALOX12BO75342 701 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 SNAP29O95721 258 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 GUSBP08236 651 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 CDH2P19022 906 aaPredicted RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 IGFBP5P24593 272 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 PIGAP37287 484 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 INSM1Q01101 510 aaPredicted RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 IL1RL1Q01638 556 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 ZIK1Q3SY52 487 aaPredicted RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 STPG1Q5TH74 334 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 KRT80Q6KB66 452 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 TCTN3Q6NUS6 607 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 MORN4Q8NDC4 146 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 ZNF555Q8NEP9 628 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 ZNF721Q8TF20 911 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 NR4A3Q92570 626 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 MR1Q95460 341 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 LRFN5Q96NI6 719 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 SLC26A1Q9H2B4 701 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 NXT1Q9UKK6 140 aaKnown RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 VSTM2BA6NLU5 285 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 C9J4A7 227 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 DLGAP1O14490 977 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 UGT2B17O75795 530 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 DDAH2O95865 285 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 CT45A8P0DMV1 189 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 CT45A9P0DMV2 189 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 CAPGP40121 348 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 DCAF7P61962 342 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 FOXD4Q12950 439 aaPredicted RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 MICAQ29983 383 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 EXOC3L2Q2M3D2 409 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 CT45A2Q5DJT8 189 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 LANCL3Q6ZV70 420 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 SLC29A4Q7RTT9 530 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 ZNF605Q86T29 641 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 RBM45Q8IUH3 476 aaKnown RBP17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 LACC1Q8IV20 430 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 PIK3C3Q8NEB9 887 aa17.36■□□□□ 0.37
TNFSF9-201ENST00000245817 OR4D11Q8NGI4 311 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms