RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF681Q96N22 645 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 RPP25Q9BUL9 199 aaKnown RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 NKX2-4Q9H2Z4 354 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 GIMAP4Q9NUV9 329 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 N6AMT1Q9Y5N5 214 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ANKRD34BA5PLL1 514 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 SLC30A4O14863 429 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ZIC2O95409 532 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 CCNYL3P0C7X3 344 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 GNSP15586 552 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 SEC13P55735 322 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ABATP80404 500 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 FABP5Q01469 135 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ZFP69Q49AA0 526 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ATAD3CQ5T2N8 411 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 TYW3Q6IPR3 259 aaKnown RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 SLC30A6Q6NXT4 461 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 QSOX2Q6ZRP7 698 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 C16orf62Q7Z3J2 963 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 LHFPL3Q86UP9 236 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 NKAIN4Q8IVV8 208 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 UFD1Q92890 307 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 FGF14Q92915 247 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 DIRAS2Q96HU8 199 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 KATNB1Q9BVA0 655 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 C6orf106Q9H6K1 298 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 EXOSC1Q9Y3B2 195 aaKnown RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 DOCK8Q8NF50 2099 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 FABP12A6NFH5 140 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 PRR19A6NJB7 356 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 FCMRO60667 390 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 ASGR2P07307 311 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 TEAD1P28347 426 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 SOX18P35713 384 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 PDX1P52945 283 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 MADCAM1Q13477 382 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 RPE65Q16518 533 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 ANKRD54Q6NXT1 300 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 VASH1Q7L8A9 365 aaPredicted RBP13.46□□□□□ -0.25
HIF3A-202ENST00000244303 DGLUCYQ7Z3D6 616 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 LSRQ86X29 649 aaPredicted RBP13.46□□□□□ -0.25
HIF3A-202ENST00000244303 RAB43Q86YS6 212 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 CAMKK1Q8N5S9 505 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 OR4Q3Q8NH05 313 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 PIGXQ8TBF5 258 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 GIMAP5Q96F15 307 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 ARHGAP9Q9BRR9 750 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 ISYNA1Q9NPH2 558 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 SLC17A4Q9Y2C5 497 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 ZNF780BQ9Y6R6 833 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 XIRP2A4UGR9 3374 aa13.46□□□□□ -0.25
HIF3A-202ENST00000244303 CENPXA8MT69 81 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 LALBAP00709 142 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 CSF3P09919 207 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 CMPK1P30085 196 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 GPR4P46093 362 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 CDH11P55287 796 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 CAV3P56539 151 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 BTN3A2P78410 334 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 DAB2P98082 770 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 SCN1BQ07699 218 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 SGCGQ13326 291 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 CEBPEQ15744 281 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 DDI2Q5TDH0 399 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 XKRXQ6PP77 449 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 FAM111BQ6SJ93 734 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 GJD3Q8N144 294 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 MFSD9Q8NBP5 474 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 KCT2Q8NC54 265 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.26
HIF3A-202ENST00000244303 OR52P1PQ8NH57 321 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 NR4A3Q92570 626 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 FCRL4Q96PJ5 515 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 MED18Q9BUE0 208 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 SARGQ9BW04 601 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 PRRG3Q9BZD7 231 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 CALML5Q9NZT1 146 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 LIPT1Q9Y234 373 aa13.46□□□□□ -0.26
HIF3A-202ENST00000244303 A8MV72 311 aaPredicted RBP13.45□□□□□ -0.26
HIF3A-202ENST00000244303 ISM1B1AKI9 464 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 TFECO14948 347 aaPredicted RBP13.45□□□□□ -0.26
HIF3A-202ENST00000244303 NDUFB5O43674 189 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 NARSO43776 548 aaKnown RBP13.45□□□□□ -0.26
HIF3A-202ENST00000244303 TMCC2O75069 709 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 THY1P04216 161 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 GABRA5P31644 462 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 IGFALSP35858 605 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 SLC1A3P43003 542 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 TSFMP43897 325 aaKnown RBP13.45□□□□□ -0.26
HIF3A-202ENST00000244303 ARFIP1P53367 373 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 RGS8P57771 180 aaPredicted RBP13.45□□□□□ -0.26
HIF3A-202ENST00000244303 TCEA2Q15560 299 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 C6orf132Q5T0Z8 1188 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF776Q68DI1 518 aaPredicted RBP13.45□□□□□ -0.26
HIF3A-202ENST00000244303 HSDL2Q6YN16 418 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 TMEM184AQ6ZMB5 413 aa13.45□□□□□ -0.26
HIF3A-202ENST00000244303 PLEKHM3Q6ZWE6 761 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms