RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 PROSER1Q86XN7 944 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 SLC44A2Q8IWA5 706 aaPredicted RBP10.6□□□□□ -0.71
CDKL1-201ENST00000216378 PARP8Q8N3A8 854 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 METTL4Q8N3J2 472 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 TMBIM1Q969X1 311 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 PPCDCQ96CD2 204 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 REPS1Q96D71 796 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 TPD52L3Q96J77 140 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 AIF1LQ9BQI0 150 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 ANKRD60Q9BZ19 345 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 REEP4Q9H6H4 257 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 MRPS30Q9NP92 439 aaKnown RBP10.6□□□□□ -0.71
CDKL1-201ENST00000216378 SIDT1Q9NXL6 827 aaKnown RBP10.6□□□□□ -0.71
CDKL1-201ENST00000216378 COQ3Q9NZJ6 369 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 PISDQ9UG56 409 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 PSME2Q9UL46 239 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 LOXL2Q9Y4K0 774 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 B3GALT1Q9Y5Z6 326 aa10.6□□□□□ -0.71
CDKL1-201ENST00000216378 FER1L5A0AVI2 2057 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 SDK2Q58EX2 2172 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 URB1O60287 2271 aaKnown RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 SERTM1A2A2V5 107 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 EFCAB7A8K855 629 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 C1QTNF9BB2RNN3 333 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 HNRNPCL2B2RXH8 293 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 FOXE1O00358 373 aaPredicted RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 NOS1APO75052 506 aaPredicted RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 C1QTNF9P0C862 333 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 BMP2P12643 396 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 BSGP35613 385 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 MAPK12P53778 367 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 MAPK10P53779 464 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 SRSF11Q05519 484 aaKnown RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 HSPB3Q12988 150 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 ZFP69Q49AA0 526 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 TMEM65Q6PI78 240 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 RAB11FIP2Q7L804 512 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 TMPRSS12Q86WS5 348 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 PLXDC1Q8IUK5 500 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 NKAIN4Q8IVV8 208 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 ZZZ3Q8IYH5 903 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 KRT78Q8N1N4 520 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 OR8K5Q8NH50 307 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 DUS3LQ96G46 650 aaKnown RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 CENPNQ96H22 339 aaPredicted RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 RNF170Q96K19 258 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 MS4A8Q9BY19 250 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 MIEF1Q9NQG6 463 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 EXD2Q9NVH0 621 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 GLTPQ9NZD2 209 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 REV1Q9UBZ9 1251 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 EPHA6Q9UF33 1036 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 ABCG2Q9UNQ0 655 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 MRPS7Q9Y2R9 242 aaKnown RBP10.59□□□□□ -0.71
CDKL1-201ENST00000216378 PKD1L2Q7Z442 2459 aa10.59□□□□□ -0.71
CDKL1-201ENST00000216378 KALRNO60229 2985 aa10.58□□□□□ -0.71
CDKL1-201ENST00000216378 ISPDA4D126 451 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 C2orf74A8MZ97 194 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 C9orf172C9J069 976 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 UPK1AO00322 258 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 TSPAN4O14817 238 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 NDUFS4O43181 175 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 DEAF1O75398 565 aaPredicted RBP10.58□□□□□ -0.72
CDKL1-201ENST00000216378 CST1P01037 141 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 LDLRP01130 860 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 RPN2P04844 631 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 GPIP06744 558 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 SDHBP21912 280 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 GABRA4P48169 554 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 CRYBA2P53672 197 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 CHRNB3Q05901 458 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 PRDX1Q06830 199 aaKnown RBP10.58□□□□□ -0.72
CDKL1-201ENST00000216378 TGIF1Q15583 401 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 GARNL3Q5VVW2 1013 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 AGAP6Q5VW22 663 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 FAM71E1Q6IPT2 247 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 FBXO42Q6P3S6 717 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 PLEKHM3Q6ZWE6 761 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 STK32CQ86UX6 486 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 RNF130Q86XS8 419 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 AMER2Q8N7J2 671 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 ANKFN1Q8N957 763 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 KCT2Q8NC54 265 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 OR8J2Q8NGG1 315 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 AGAP4Q96P64 663 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 OR6C1Q96RD1 312 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 ZNF768Q9H5H4 540 aaKnown RBP10.58□□□□□ -0.72
CDKL1-201ENST00000216378 POLE4Q9NR33 117 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 FBXW2Q9UKT8 454 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 TLCD2A6NGC4 264 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 HMX3A6NHT5 357 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 HSD3B1P14060 373 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 CBLP22681 906 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 HSD3B2P26439 372 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 UQCRC1P31930 480 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 CCKBRP32239 447 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 RAD23AP54725 363 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 GABREP78334 506 aa10.58□□□□□ -0.72
CDKL1-201ENST00000216378 REEP5Q00765 189 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms