RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CAPRIN1Q14444 709 aaKnown RBP18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 SPINK14Q6IE38 97 aa18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 EXD3Q8N9H8 876 aa18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 LSM14AQ8ND56 463 aaKnown RBP18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 HOPXQ9BPY8 73 aaPredicted RBP18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 CPPED1Q9BRF8 314 aaPredicted RBP18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 SACM1LQ9NTJ5 587 aa18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 AP3M1Q9Y2T2 418 aa18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 KLF13Q9Y2Y9 288 aaPredicted RBP18.58■□□□□ 0.57
RHBDD3-201ENST00000216085 TSPAN2O60636 221 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 NEURL1O76050 574 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 CALB2P22676 271 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 ZNF169Q14929 603 aaPredicted RBP18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 TBCELQ5QJ74 424 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 COX20Q5RI15 118 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 SLC22A10Q63ZE4 541 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 FIGNL1Q6PIW4 674 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 TEX19Q8NA77 164 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 PSD4Q8NDX1 1056 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 CHDHQ8NE62 594 aaPredicted RBP18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 OR10G3Q8NGC4 313 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 RAB8BQ92930 207 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 NSL1Q96IY1 281 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 ARL8BQ9NVJ2 186 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 CALML5Q9NZT1 146 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 B3GNT3Q9Y2A9 372 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 PCDHGB6Q9Y5F9 930 aa18.58■□□□□ 0.56
RHBDD3-201ENST00000216085 NBEAQ8NFP9 2946 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 TLN1Q9Y490 2541 aaKnown RBP18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 K7EM74 188 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 ETFAP13804 333 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 GPX2P18283 190 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 CLK3P49761 638 aaKnown RBP18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 ST13P50502 369 aaKnown RBP18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 MTPNP58546 118 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 CYP51A1Q16850 503 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 ARHGAP11BQ3KRB8 267 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 GPAT3Q53EU6 434 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 ZNF766Q5HY98 468 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 GCNT6Q5T4J0 391 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 SLC25A25Q6KCM7 469 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 NANOGP8Q6NSW7 305 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 Q6ZS92 163 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 FAM98AQ8NCA5 519 aaKnown RBP18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 MDS2Q8NDY4 140 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 PAQR8Q8TEZ7 354 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 SIGLEC12Q96PQ1 595 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 SLC39A3Q9BRY0 314 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 NANOGQ9H9S0 305 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 POLE3Q9NRF9 147 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 L3MBTL1Q9Y468 752 aa18.57■□□□□ 0.56
RHBDD3-201ENST00000216085 FXYD1O00168 92 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 UGT2B11O75310 529 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 STX11O75558 287 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 NR2F1P10589 423 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 HPGDP15428 266 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 CPA2P48052 419 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 MVDP53602 400 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 LY6DQ14210 128 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 HEPHL1Q6MZM0 1159 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 FAM110BQ8TC76 370 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 ECSITQ9BQ95 431 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 SPATA9Q9BWV2 254 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 HOXD1Q9GZZ0 328 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 METTL7AQ9H8H3 244 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 CACYBPQ9HB71 228 aaKnown RBP18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 SPTA1P02549 2419 aa18.56■□□□□ 0.56
RHBDD3-201ENST00000216085 C5orf58C9J3I9 102 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 ATXN7O15265 892 aaPredicted RBP18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 CBX6O95503 412 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 SP1P08047 785 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 CD97P48960 835 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 CRISP3P54108 245 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 KLRB1Q12918 225 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 CCNJQ5T5M9 372 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 FBXW8Q8N3Y1 598 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 RBMXL3Q8N7X1 1067 aaKnown RBP18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 ZNF527Q8NB42 609 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 CATSPER1Q8NEC5 780 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 SPPL2AQ8TCT8 520 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 PNPLA2Q96AD5 504 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 TRNT1Q96Q11 434 aaKnown RBP18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 MFRPQ9BY79 579 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 HHATLQ9HCP6 504 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 KLHL1Q9NR64 748 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 KLRF1Q9NZS2 232 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 ABCG2Q9UNQ0 655 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 KCNE3Q9Y6H6 103 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 TNRC6AQ8NDV7 1962 aaKnown RBP18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 KLRC4-KLRK1H3BQV0 150 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 SLC28A2O43868 658 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 NME2P1O60361 137 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 BMP2P12643 396 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 CYP4B1P13584 511 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 NME2P22392 152 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 SNTA1Q13424 505 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 FLYWCH1Q4VC44 716 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 C16orf89Q6UX73 402 aa18.55■□□□□ 0.56
RHBDD3-201ENST00000216085 SERPINA11Q86U17 422 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms