RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CYP7B1O75881 506 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 OR5F1O95221 314 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 CSF2RBP32927 897 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 PPM1FP49593 454 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 CDC42P60953 191 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 POU6F2P78424 691 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 MAT1AQ00266 395 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 MVKQ03426 396 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 SERTAD2Q14140 314 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 SLX4IPQ5VYV7 408 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF836Q6ZNA1 936 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 PRSS48Q7RTY5 328 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 ERI1Q8IV48 349 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 P3H2Q8IVL5 708 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 OR52R1Q8NGF1 315 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 GPR151Q8TDV0 419 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 SLC38A4Q969I6 547 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 DUSP23Q9BVJ7 150 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 RASSF1Q9NS23 344 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 CUTCQ9NTM9 273 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 FKBP14Q9NWM8 211 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 ERVK-18Q9QC07 812 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 PILRBQ9UKJ0 227 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 MMACHCQ9Y4U1 282 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 A0A1B0GTQ1 180 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 SH3D21A4FU49 640 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 AP3D1O14617 1153 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 RGS10O43665 173 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 OR2B3O76000 313 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 CCNYL3P0C7X3 344 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 NID1P14543 1247 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 GSTM3P21266 225 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 GABRA3P34903 492 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 IFNGR2P38484 337 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 DHPSP49366 369 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 EMDP50402 254 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 TMBIM6P55061 237 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 RGS8P57771 180 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 TAS2R41P59536 307 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 FUT7Q11130 342 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 SMN1Q16637 294 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 ENTPD8Q5MY95 495 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 YOD1Q5VVQ6 348 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 ZER1Q7Z7L7 766 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 SVOPQ8N4V2 548 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 VSTM2LQ96N03 204 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 DGAT2Q96PD7 388 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 OR1F2PQ96R84 312 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 LHPPQ9H008 270 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 FOLH1BQ9HBA9 442 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 IRAK4Q9NWZ3 460 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 IMPAD1Q9NX62 359 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 AASSQ9UDR5 926 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 PSORS1C1Q9UIG5 152 aa13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 TMEM184BQ9Y519 407 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 HEMK1Q9Y5R4 338 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-201ENST00000023939 FMO6PO60774 539 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 TRMUO75648 421 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 TP53P04637 393 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 MMP11P24347 488 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ACVR2AP27037 513 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 IDH2P48735 452 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ARL4DP49703 201 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 SNRPGP62308 76 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 PSG6Q00889 435 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 EMX1Q04741 257 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 PIGFQ07326 219 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF155Q12901 538 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 TARDBPQ13148 414 aaKnown RBP eCLIP13.3□□□□□ -0.284e-6■■■■□ 19.5
RTFDC1-201ENST00000023939 ZNHIT3Q15649 155 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 DECR1Q16698 335 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 CCNJQ5T5M9 372 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 PEAR1Q5VY43 1037 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 C12orf73Q69YU5 71 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 CCDC103Q8IW40 242 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF540Q8NDQ6 660 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 DOK4Q8TEW6 326 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 TRUB1Q8WWH5 349 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 PIK3R3Q92569 461 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 MCHR1Q99705 422 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 RBCK1Q9BYM8 510 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 LANCL2Q9NS86 450 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 SEMA4GQ9NTN9 838 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 KLHL3Q9UH77 587 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 CDC14AQ9UNH5 594 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 A0A087WUU8 490 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF99A8MXY4 864 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 TMEM150CB9EJG8 249 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 YKT6O15498 198 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 PRAMEF2O60811 474 aa13.3□□□□□ -0.28
RTFDC1-201ENST00000023939 KCNK2O95069 426 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms