RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 MlycdQ99J39 492 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Hrasls5Q9CPX5 270 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Prps2Q9CS42 318 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tmed10Q9D1D4 219 aaKnown RBP11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Spns3Q9D232 514 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Sun1Q9D666 913 aaKnown RBP11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Med8Q9D7W5 268 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Natd1Q9DBW3 110 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Nusap1Q9ERH4 427 aaKnown RBP11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Klhl1Q9JI74 751 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Plag1Q9QYE0 499 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Vmn1r10W4VSP8 311 aa11.16□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Usp9xP70398 2559 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Sptbn1Q62261 2363 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gm10406A6NAS4 205 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 SiglechB7ZMQ6 332 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Nlrp12E9Q5R7 1054 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 FkbplO35450 347 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tcstv3O70518 169 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Dnmt3bO88509 859 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Rpl3P27659 403 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Pcsk4P29121 655 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 MagohP61327 146 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Mapk1P63085 358 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Il11ra2P70225 432 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 JupQ02257 745 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Bcl2l15Q08ED0 167 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ripk1Q60855 656 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 CpQ61147 1061 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 CmahQ61419 577 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Glt8d2Q640P4 349 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Il11ra1Q64385 432 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Plk4Q64702 925 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Frg2f1Q6P3A2 227 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Abhd17bQ7M759 288 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ffar4Q7TMA4 361 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Syt16Q7TN83 639 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Oog2Q7TPX8 476 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tas2r136Q7TQA8 305 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Mrps7Q80X85 242 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Crls1Q80ZM8 303 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ppp1r12bQ8BG95 976 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Nipal3Q8BGN5 410 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Mfsd8Q8BH31 519 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Nceh1Q8BLF1 408 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 E330017A01RikQ8BU47 192 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gk5Q8BX05 534 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tprg1Q8CB49 279 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Mfsd6Q8CBH5 775 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Rdh13Q8CEE7 334 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Serpina11Q8CIE0 424 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Q8K039 155 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Obp2aQ8K1H9 176 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Angptl7Q8R1Q3 337 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Vmn1r84Q8R284 318 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Cuedc1Q8R3V6 388 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 TgdsQ8VDR7 355 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Olfr935Q8VG16 308 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Olfr617Q8VGA1 318 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Pear1Q8VIK5 1034 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 ChiaQ91XA9 473 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Abhd3Q91ZH7 411 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tceal1Q921P9 165 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gpr146Q99LE2 333 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Q9CPS8 106 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 MagohbQ9CQL1 146 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 4931417E11RikQ9CR05 305 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Gm10762Q9CZN6 115 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Tstd3Q9D0B5 157 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Slc35a4Q9D321 324 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Echdc3Q9D7J9 300 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Trappc4Q9ES56 219 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Rpl38Q9JJI8 70 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Dnajb12Q9QYI4 376 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Kcne3Q9WTW2 103 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Cldn6Q9Z262 219 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 OtoglF7A4A7 2325 aa11.15□□□□□ -0.62
Ccdc28a-202ENSMUST00000080860 Ighv16-1A0A0A6YW39 117 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Igkv19-93A0A0G2JFZ3 115 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 DytnA2CI98 653 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Spata6lB2RV46 347 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tas2r122D3YU55 309 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Mn1D3YWE6 1297 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn2r49D3Z6L3 852 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zbtb25G3UW50 439 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn2r32K7N686 852 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn2r42O35192 852 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cyp4a10O88833 509 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 P06336 421 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gdf1P20863 357 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Olfr13P34984 310 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Foxa1P35582 468 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Dpagt1P42867 410 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Nr5a2P45448 560 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Efna2P52801 209 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Ucp3P56501 308 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 PilraQ2YFS3 302 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Q3U7U4 132 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Faap20Q3UN58 186 aa11.14□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cpxcr1Q3V0P1 322 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms