RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mansc4Q3UU94 337 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fam122bQ6NZE7 255 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Plcxd1Q8CHS4 345 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gfm1Q8K0D5 751 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Katnal1Q8K0T4 488 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Abhd6Q8R2Y0 336 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ccdc71lE9Q4T4 218 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Obox5G3X9P6 291 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ifi204P0DOV2 619 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hsd17b3P70385 305 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr776Q7TRI3 312 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tgif2Q8C0Y1 237 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zbtb20Q8K0L9 741 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Irf2bplQ8K3X4 775 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr52Q8VFL0 319 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr691Q8VGW5 322 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 NansQ99J77 359 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mrps17Q9CQE3 120 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dhrs7Q9CXR1 338 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ppa1Q9D819 289 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 TriobpQ99KW3 2014 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfp534A2A7A1 661 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1425K7N659 312 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 PipP02816 146 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 TshrP47750 764 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tbpl1P62340 186 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 VegfaQ00731 214 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ermp1Q3UVK0 898 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Crtc1Q68ED7 630 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mfsd4aQ6PDC8 510 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1426Q8VG74 311 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tmem98Q91X86 226 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1188A2AV10 312 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pdlim1O70400 327 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Klrg1O88713 188 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Myf6P15375 242 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pou3f4P62515 361 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 CelQ64285 599 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 RgmaQ6PCX7 454 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr285Q7TS17 319 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 1700001K19RikQ80ZT1 219 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc7a11Q9WTR6 502 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 CerklA2AQH1 525 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 CatsperbA2RTF1 1109 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr370E9Q848 314 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pdlim3O70209 316 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 BlkP16277 499 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gja5Q01231 358 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 UnklQ5FWH2 727 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dag1Q62165 893 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hfe2Q7TQ32 420 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 TpppQ7TQD2 218 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1126Q7TR49 314 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1351Q8VGU6 319 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fmo4Q8VHG0 560 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Eif2b1Q99LC8 305 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Trmt10bQ9D075 318 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cers4Q9D6J1 393 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dbf4Q9QZ41 663 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Asic5Q9R0Y1 495 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 N4bp2F8VQG7 1678 aaKnown RBP11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 SpaarA0A1B0GSZ0 75 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm13102A2ASJ3 519 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Skint4A7TZF3 474 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfp395E9Q5N9 508 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm8888J3QPX5 126 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Chrnb1P09690 501 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 GlaP51569 419 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rps26P62855 115 aaKnown RBP11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 ElocP83940 112 aaKnown RBP11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc16a9Q7TM99 508 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 ExogQ8C163 368 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 HopxQ8R1H0 73 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Efcab10Q9D581 132 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Actl11Q9D5V1 1207 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cldn19Q9ET38 224 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Znf318Q99PP2 2237 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 AldoaP05064 364 aaKnown RBP11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rab19P35294 217 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zbtb48Q1H9T6 681 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hsh2dQ6VYH9 334 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Kctd20Q8CDD8 419 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Lrrc66Q8K0B3 872 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fam110cQ8VE94 421 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 MvdQ99JF5 401 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Wdr53Q9DB94 358 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nme4Q9WV84 186 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Lgr5Q9Z1P4 907 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc6a11P31650 627 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gnb3Q61011 340 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zmpste24Q80W54 475 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vmn1r38Q8R2E1 302 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr771Q8VFH6 317 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 DenrQ9CQJ6 198 aaKnown RBP11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rab3bQ9CZT8 219 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 OcstampQ9D611 498 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mageh1Q9NWG9 218 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Serinc1Q9QZI8 453 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cry2Q9R194 592 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cav2Q9WVC3 162 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms