RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 EFCAB11Q9BUY7 163 aa12.49□□□□□ -0.41
CYFIP1-211ENST00000619348 FAIM2Q9BWQ8 316 aa12.49□□□□□ -0.41
CYFIP1-211ENST00000619348 ISG20L2Q9H9L3 353 aaKnown RBP12.49□□□□□ -0.41
CYFIP1-211ENST00000619348 TDP1Q9NUW8 608 aa12.49□□□□□ -0.41
CYFIP1-211ENST00000619348 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
CYFIP1-211ENST00000619348 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 MAGEB4O15481 346 aaPredicted RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 FMO6PO60774 539 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 SLC19A2O60779 497 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 TFP02787 698 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ITGB7P26010 798 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 SIGLEC14Q08ET2 396 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 TMEM115Q12893 351 aaPredicted RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 AKIRIN2Q53H80 203 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 LRRTM4Q86VH4 590 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 NRMQ8IXM6 262 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 SLC5A11Q8WWX8 675 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 MCCC2Q9HCC0 563 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 DMRT3Q9NQL9 472 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 NLGN3Q9NZ94 848 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 TEX51A0A1B0GUA7 166 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 TMEM229AB2RXF0 380 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 MMP20O60882 483 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 TRIM3O75382 744 aaPredicted RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ZNF821O75541 412 aaPredicted RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 STX11O75558 287 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 CFDP00746 253 aaPredicted RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 DGCR2P98153 550 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 RAB40BQ12829 278 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 FAM122CQ6P4D5 195 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 QSOX2Q6ZRP7 698 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 C17orf64Q86WR6 236 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 FBXO15Q8NCQ5 510 aaPredicted RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 ZNF354BQ96LW1 612 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 POLDIP3Q9BY77 421 aaKnown RBP12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 REV1Q9UBZ9 1251 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 CHST2Q9Y4C5 530 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
CYFIP1-211ENST00000619348 H0YIV9 168 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 C4BPBP20851 252 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 MVDP53602 400 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 MS4A4AQ96JQ5 239 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SAMD8Q96LT4 415 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 GPA33Q99795 319 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 TRAF4Q9BUZ4 470 aaPredicted RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 GSX2Q9BZM3 304 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PPA2Q9H2U2 334 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PHF11Q9UIL8 331 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 AK6Q9Y3D8 172 aaKnown RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SLC9B1P1A6NJY1 282 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 LIMS3P0CW19 117 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 LIMS4P0CW20 117 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 ACADMP11310 421 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 NDUFAF5Q5TEU4 345 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 FAAP20Q6NZ36 180 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 METTL2BQ6P1Q9 378 aaKnown RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SLCO4C1Q6ZQN7 724 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SLC51BQ86UW2 128 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 OR13C5Q8NGS8 318 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PXYLP1Q8TE99 480 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SENP5Q96HI0 755 aaPredicted RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 TMEM38AQ9H6F2 299 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 ERVMER34-1Q9H9K5 563 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 TAAR2Q9P1P5 351 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PARP14Q460N5 1801 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 IRGMA1A4Y4 181 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 CA12O43570 354 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 EFCAB14O75071 495 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 POP4O95707 220 aaKnown RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SOD1P00441 154 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 HOXB9P17482 250 aaPredicted RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 IL32P24001 234 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 NTSP30990 170 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PPM1FP49593 454 aaPredicted RBP12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 EPHB3P54753 998 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SP140Q13342 867 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 MPEG1Q2M385 716 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 C22orf39Q6P5X5 142 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 OR52L1Q8NGH7 329 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 UCN3Q969E3 161 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 SPG21Q9NZD8 308 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 COPS3Q9UNS2 423 aa12.47□□□□□ -0.41
CYFIP1-211ENST00000619348 PSMD9O00233 223 aa12.46□□□□□ -0.41
CYFIP1-211ENST00000619348 FZD7O75084 574 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms