RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 HACD2Q6Y1H2 254 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 OTUD6AQ7L8S5 288 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 NFE4Q86UQ8 179 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 NAGSQ8N159 534 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 CLEC4FQ8N1N0 589 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 PDCL2Q8N4E4 241 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 CLDN19Q8N6F1 224 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 IQCF1Q8N6M8 205 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 OR9Q2Q8NGE9 314 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 OR1L4Q8NGR5 311 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 OR1F12Q8NHA8 337 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 ZNRF4Q8WWF5 429 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 NEUROG1Q92886 237 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 RBM14Q96PK6 669 aaKnown RBP4.35□□□□□ -1.71
RFC3-203ENST00000616236 GSDMAQ96QA5 445 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 PANX1Q96RD7 426 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 OVOL2Q9BRP0 275 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 TSSK1BQ9BXA7 367 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 STRADBQ9C0K7 418 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 COMMD4Q9H0A8 199 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 POLR3FQ9H1D9 316 aaPredicted RBP4.35□□□□□ -1.71
RFC3-203ENST00000616236 LRRN3Q9H3W5 708 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 SLC2A8Q9NY64 477 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.35□□□□□ -1.71
RFC3-203ENST00000616236 TAAR2Q9P1P5 351 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 ZNF639Q9UID6 485 aa4.35□□□□□ -1.71
RFC3-203ENST00000616236 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.35□□□□□ -1.71
RFC3-203ENST00000616236 K7ERI5 159 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 EFNA2O43921 213 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 CDH16O75309 829 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 STX11O75558 287 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 MTRF1O75570 445 aaKnown RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 BBOX1O75936 387 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 CAVIN2O95810 425 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 TROVE2P10155 538 aaKnown RBP eCLIP4.34□□□□□ -1.71
RFC3-203ENST00000616236 ERVK-10P10266 1014 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 RALBP11234 206 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 POU2F1P14859 743 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 NMT1P30419 496 aaKnown RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 GPR183P32249 361 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 MAGEA1P43355 309 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 EIF3EP60228 445 aaKnown RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 NTHL1P78549 312 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 LTBQ06643 244 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 BNIP1Q12981 228 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 ATXN7L3Q14CW9 347 aaPredicted RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 UBE2V2Q15819 145 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 SGSM1Q2NKQ1 1148 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 SPANXN2Q5MJ10 180 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 FAM71F2Q6NXP2 309 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 ATRAIDQ6UW56 229 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 CYS1Q717R9 158 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 BZW1Q7L1Q6 419 aaKnown RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 LACC1Q8IV20 430 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 GPR137CQ8N3F9 429 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 BPIFCQ8NFQ6 507 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 M1APQ8TC57 530 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 DNAJA4Q8WW22 397 aaPredicted RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 ST8SIA1Q92185 356 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 ZNF486Q96H40 463 aaPredicted RBP4.34□□□□□ -1.71
RFC3-203ENST00000616236 C12orf66Q96MD2 445 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 BPIFA3Q9BQP9 254 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 Q9HAA7 133 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 KLK11Q9UBX7 282 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 ANAPC7Q9UJX3 599 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 TNIKQ9UKE5 1360 aa4.34□□□□□ -1.71
RFC3-203ENST00000616236 ATP10AO60312 1499 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 PNPLA6Q8IY17 1366 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 LINC00854A0A1B0GVQ3 168 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 A0A1W2PR80 420 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 CD8B2A6NJW9 211 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 OR7A17O14581 309 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 ARHGEF9O43307 516 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 SRPX2O60687 465 aaPredicted RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 DUSP11O75319 330 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 TRMUO75648 421 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 CDC123O75794 336 aaPredicted RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 SORBS2O94875 1100 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 KRT14P02533 472 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 OR8G3PP0DMU2 310 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 GDF5P43026 501 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 BDKRB1P46663 353 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 LEPRP48357 1165 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 DSCR9P59020 149 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 DMTNQ08495 405 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 DOC2AQ14183 400 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 GCKRQ14397 625 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 ACCSLQ4AC99 568 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 UNC50Q53HI1 259 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 SFT2D3Q587I9 215 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 RNASEKQ6P5S7 137 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 UQCC3Q6UW78 93 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 TRPT1Q86TN4 253 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 TBC1D10CQ8IV04 446 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 ALLCQ8N6M5 410 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 MFSD9Q8NBP5 474 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 POC1AQ8NBT0 407 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms