RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SIGLEC5O15389 551 aa15.03■□□□□ -0
RTN1-209ENST00000611068 HRO43593 1189 aa15.03■□□□□ -0
RTN1-209ENST00000611068 AKAP8O43823 692 aaKnown RBP15.03■□□□□ -0
RTN1-209ENST00000611068 POU2F1P14859 743 aa15.03■□□□□ -0
RTN1-209ENST00000611068 SIGLEC14Q08ET2 396 aa15.03■□□□□ -0
RTN1-209ENST00000611068 MED22Q15528 200 aa15.03■□□□□ -0
RTN1-209ENST00000611068 FBXO43Q4G163 708 aa15.03■□□□□ -0
RTN1-209ENST00000611068 FAM92BQ6ZTR7 304 aa15.03■□□□□ -0
RTN1-209ENST00000611068 GHDCQ8N2G8 530 aa15.03■□□□□ -0
RTN1-209ENST00000611068 MYDGFQ969H8 173 aa15.03■□□□□ -0
RTN1-209ENST00000611068 INSM2Q96T92 566 aaPredicted RBP15.03■□□□□ -0
RTN1-209ENST00000611068 CDX2Q99626 313 aaPredicted RBP15.03■□□□□ -0
RTN1-209ENST00000611068 CLEC4MQ9H2X3 399 aaPredicted RBP15.03■□□□□ -0
RTN1-209ENST00000611068 RPH3AQ9Y2J0 694 aaPredicted RBP15.03■□□□□ -0
RTN1-209ENST00000611068 FAM74A7A6NL05 159 aa15.02■□□□□ -0
RTN1-209ENST00000611068 SLC28A1O00337 649 aa15.02■□□□□ -0
RTN1-209ENST00000611068 SH3BP5O60239 455 aa15.02■□□□□ -0
RTN1-209ENST00000611068 HPGDSO60760 199 aa15.02■□□□□ -0
RTN1-209ENST00000611068 SERPINA1P01009 418 aa15.02■□□□□ -0
RTN1-209ENST00000611068 SLC35G4P0C7Q5 338 aa15.02■□□□□ -0
RTN1-209ENST00000611068 APEX1P27695 318 aaKnown RBP15.02■□□□□ -0
RTN1-209ENST00000611068 PUDPQ08623 228 aa15.02■□□□□ -0
RTN1-209ENST00000611068 DSG2Q14126 1118 aa15.02■□□□□ -0
RTN1-209ENST00000611068 FAM174BQ3ZCQ3 159 aa15.02■□□□□ -0
RTN1-209ENST00000611068 FAM74A3Q4VXF1 159 aa15.02■□□□□ -0
RTN1-209ENST00000611068 METRNLQ641Q3 311 aa15.02■□□□□ -0
RTN1-209ENST00000611068 GPR153Q6NV75 609 aa15.02■□□□□ -0
RTN1-209ENST00000611068 ANKRD46Q86W74 232 aa15.02■□□□□ -0
RTN1-209ENST00000611068 ATP6V1C2Q8NEY4 427 aa15.02■□□□□ -0
RTN1-209ENST00000611068 LINC00615Q96LM1 132 aaPredicted RBP15.02■□□□□ -0
RTN1-209ENST00000611068 PPP3R2Q96LZ3 170 aa15.02■□□□□ -0
RTN1-209ENST00000611068 CCDC115Q96NT0 180 aa15.02■□□□□ -0
RTN1-209ENST00000611068 RBCK1Q9BYM8 510 aa15.02■□□□□ -0
RTN1-209ENST00000611068 FOXQ1Q9C009 403 aa15.02■□□□□ -0
RTN1-209ENST00000611068 C6orf106Q9H6K1 298 aaPredicted RBP15.02■□□□□ -0
RTN1-209ENST00000611068 C1orf109Q9NX04 203 aa15.02■□□□□ -0
RTN1-209ENST00000611068 ZNF222Q9UK12 451 aa15.02■□□□□ -0
RTN1-209ENST00000611068 PCDHGA6Q9Y5G7 932 aa15.02■□□□□ -0
RTN1-209ENST00000611068 SLCO1B1Q9Y6L6 691 aa15.02■□□□□ -0
RTN1-209ENST00000611068 C17orf113A0A1B0GUU1 675 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 CLCA1A8K7I4 914 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 EML2O95834 649 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 BCKDHAP12694 445 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 HSD17B2P37059 387 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 PNLIPRP1P54315 467 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 MRPS21P82921 87 aaKnown RBP15.02□□□□□ -0.01
RTN1-209ENST00000611068 UBXN2BQ14CS0 331 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 HSD17B12Q53GQ0 312 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 PTCRAQ6ISU1 281 aaPredicted RBP15.02□□□□□ -0.01
RTN1-209ENST00000611068 BHLHB9Q6PI77 547 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 TRIM46Q7Z4K8 759 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 PDZD3Q86UT5 571 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 ZNF655Q8N720 491 aaPredicted RBP15.02□□□□□ -0.01
RTN1-209ENST00000611068 ATG16L2Q8NAA4 619 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 DUSP18Q8NEJ0 188 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 OR56A3Q8NH54 315 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.02□□□□□ -0.01
RTN1-209ENST00000611068 CXorf58Q96LI9 332 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 MARVELD1Q9BSK0 173 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 THUMPD3Q9BV44 507 aaKnown RBP15.02□□□□□ -0.01
RTN1-209ENST00000611068 BRINP2Q9C0B6 783 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 BTBD1Q9H0C5 482 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 PIGUQ9H490 435 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 PDP1Q9P0J1 537 aaPredicted RBP15.02□□□□□ -0.01
RTN1-209ENST00000611068 COPZ2Q9P299 210 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 MALT1Q9UDY8 824 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 TAC3Q9UHF0 121 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 MGAT4BQ9UQ53 548 aa15.02□□□□□ -0.01
RTN1-209ENST00000611068 A0A1W2PQL4 384 aaPredicted RBP15.01□□□□□ -0.01
RTN1-209ENST00000611068 SMIM30A4D0T7 59 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 PROM1O43490 865 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 TGFB1P01137 390 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 JUPP14923 745 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 RORCP51449 518 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 AGFG1P52594 562 aaKnown RBP15.01□□□□□ -0.01
RTN1-209ENST00000611068 RPL6Q02878 288 aaKnown RBP15.01□□□□□ -0.01
RTN1-209ENST00000611068 ST3GAL4Q11206 333 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 KRT33BQ14525 404 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 CDKL4Q5MAI5 379 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 SPANXN4Q5MJ08 99 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 KIAA1161Q6NSJ0 714 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 SLC34A3Q8N130 599 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 STX19Q8N4C7 294 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 L3MBTL4Q8NA19 623 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 OR11H7Q8NGC8 314 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 NETO1Q8TDF5 533 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 HLA-CQ95604 372 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 MTERF3Q96E29 417 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 COL21A1Q96P44 957 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 MGLLQ99685 303 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 PELOQ9BRX2 385 aaKnown RBP15.01□□□□□ -0.01
RTN1-209ENST00000611068 KRT84Q9NSB2 600 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 SPASTQ9UBP0 616 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 NUP214P35658 2090 aaPredicted RBP15.01□□□□□ -0.01
RTN1-209ENST00000611068 INMT-MINDY4F8WBC2 141 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 M0R129 80 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 STK25O00506 426 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 FABP1P07148 127 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 TDGQ13569 410 aa15.01□□□□□ -0.01
RTN1-209ENST00000611068 SLBPQ14493 270 aaKnown RBP eCLIP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms