RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GBE1Q04446 702 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 SRYQ05066 204 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 KLHL30Q0D2K2 578 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 SEL1L2Q5TEA6 688 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 RAET1GQ6H3X3 334 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 P4HA3Q7Z4N8 544 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 TSEN54Q7Z6J9 526 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 CDC20BQ86Y33 519 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 SLC22A18ASQ8N1D0 253 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 LYG1Q8N1E2 194 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 FAM71CQ8NEG0 241 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 DENND6BQ8NEG7 585 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 ZNF671Q8TAW3 534 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 TBCKQ8TEA7 893 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 CRYGNQ8WXF5 182 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 C1orf147Q96MC9 270 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 FOXN4Q96NZ1 517 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 MCCC1Q96RQ3 725 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 ERVK-6Q9BXR3 956 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 TRIM9Q9C026 710 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 ZBP1Q9H171 429 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 YY1AP1Q9H869 796 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 NGBQ9NPG2 151 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 CENPMQ9NSP4 180 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 RBM28Q9NW13 759 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 C6orf203Q9P0P8 240 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 DHRS4-AS1Q9P1J3 65 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 NOSIPQ9Y314 301 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 CLCA3PQ9Y6N3 262 aa3.34□□□□□ -1.87
SMCHD1-213ENST00000609587 FER1L5A0AVI2 2057 aa3.34□□□□□ -1.88
SMCHD1-213ENST00000609587 UNC13AQ9UPW8 1703 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 IGHV3OR16-12A0A075B7B8 117 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 A0A087WWV3 80 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 MFSD2BA6NFX1 497 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 NPIPA2E9PIF3 369 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 K7EPI3 171 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 PDLIM1O00151 329 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 LGALS8O00214 317 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 TYROBPO43914 113 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 SDC3O75056 442 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 KBTBD11O94819 623 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 KIAA0754O94854 1291 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 TRIM16O95361 564 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 PTBP3O95758 552 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 IGSF6O95976 241 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 PIGRP01833 764 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 GHRP10912 638 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 NEFHP12036 1026 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 CD9P21926 228 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 PTPN6P29350 595 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 CHRNA3P32297 505 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 HMGCS2P54868 508 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 POLR2FP61218 127 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 FUT7Q11130 342 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 SPP2Q13103 211 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 ISLR2Q6UXK2 745 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 PRSS48Q7RTY5 328 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 VPS36Q86VN1 386 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 P2RY8Q86VZ1 359 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 ARFGAP2Q8N6H7 521 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 MINDY2Q8NBR6 621 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 ANKRD20A12PQ8NF67 263 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 AGAP11Q8TF27 550 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 SHC3Q92529 594 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 NCLNQ969V3 563 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 MRPL38Q96DV4 380 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 ZBED6CLQ96FA7 236 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 C16orf45Q96MC5 204 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 APOL2Q9BQE5 337 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 WRAP53Q9BUR4 548 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 ROPN1Q9HAT0 212 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 RPS10P5Q9NQ39 176 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 CUTCQ9NTM9 273 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 GDAP2Q9NXN4 497 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 CLEC5AQ9NY25 188 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 GPR83Q9NYM4 423 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 TAS2R3Q9NYW6 316 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 MBD2Q9UBB5 411 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 HPCAL4Q9UM19 191 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 TRAF3IP3Q9Y228 551 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 N6AMT1Q9Y5N5 214 aa3.33□□□□□ -1.88
SMCHD1-213ENST00000609587 TRAV9-2A0A087WT02 112 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF840PA6NDX5 716 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 E9PMD0 336 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 C11orf98E9PRG8 122 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 SGK494L7N484 410 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 SRPX2O60687 465 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF354AO60765 605 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF253O75346 499 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 E2F6O75461 281 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 IGHV3-9P01782 118 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 HOXB7P09629 217 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC35G4P0C7Q5 338 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 FUT1P19526 365 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 IST1P53990 364 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 CCNA1P78396 465 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 IL9RQ01113 521 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms