RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
TRIM11-205ENST00000602308 ITPAQ9BY32 194 aa12.65□□□□□ -0.38
TRIM11-205ENST00000602308 DSN1Q9H410 356 aa12.65□□□□□ -0.38
TRIM11-205ENST00000602308 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
TRIM11-205ENST00000602308 POU2F3Q9UKI9 436 aa12.65□□□□□ -0.38
TRIM11-205ENST00000602308 PMF1-BGLAPU3KQ54 211 aa12.65□□□□□ -0.38
TRIM11-205ENST00000602308 ARFGEF3Q5TH69 2177 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 LILRA1O75019 489 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 TUBBP07437 444 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 APEX1P27695 318 aaKnown RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 BUD31P41223 144 aaPredicted RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 BASP1P80723 227 aaKnown RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 STK11Q15831 433 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 OR4C11Q6IEV9 310 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 SLC22A25Q6T423 547 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 BHLHA15Q7RTS1 189 aaPredicted RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 GBP7Q8N8V2 638 aaPredicted RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 ZDHHC22Q8N966 263 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 FBF1Q8TES7 1133 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 HPS1Q92902 700 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 GLRX2Q9NS18 164 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 ING1Q9UK53 422 aaPredicted RBP12.64□□□□□ -0.39
TRIM11-205ENST00000602308 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 FKBP7Q9Y680 259 aa12.64□□□□□ -0.39
TRIM11-205ENST00000602308 OR6C70A6NIJ9 312 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 EIF1AYO14602 144 aaKnown RBP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 EEDO75530 441 aaKnown RBP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 TGFB1P01137 390 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 BMP4P12644 408 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 SCGB2A2Q13296 93 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 ITGADQ13349 1161 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 NUFIP2Q7Z417 695 aaKnown RBP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 ZNF540Q8NDQ6 660 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 OR2M3Q8NG83 312 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 OR7G1Q8NGA0 311 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 OR52B6Q8NGF0 335 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 OR10D3Q8NH80 312 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 RNF138Q8WVD3 245 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 TMBIM1Q969X1 311 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 COL21A1Q96P44 957 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 USB1Q9BQ65 265 aaKnown RBP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 TSGA10Q9BZW7 698 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 DDX47Q9H0S4 455 aaKnown RBP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 UNKLQ9H9P5 680 aaKnown RBP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM11-205ENST00000602308 ABHD10Q9NUJ1 306 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 PHF11Q9UIL8 331 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 AP4B1Q9Y6B7 739 aa12.63□□□□□ -0.39
TRIM11-205ENST00000602308 NPIPA5A0A0B4J1W7 369 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 A0A1W2PR48 441 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 NPIPA7E9PJI5 369 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 ACOX3O15254 700 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 TACSTD2P09758 323 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 NPIPA8P0DM63 369 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 PCMT1P22061 227 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 GABRB3P28472 473 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 CHN2P52757 468 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 CHRNB3Q05901 458 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 MAP4K2Q12851 820 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
TRIM11-205ENST00000602308 TMEM35AQ53FP2 167 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 GALNT10Q86SR1 603 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 ADCY4Q8NFM4 1077 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 OR2W6PQ8NHA6 318 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 ADGRG7Q96K78 797 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 EGFL8Q99944 293 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 OR51B5Q9H339 312 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 KCNF1Q9H3M0 494 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 EHD1Q9H4M9 534 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 ZBTB26Q9HCK0 441 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 MED11Q9P086 117 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
TRIM11-205ENST00000602308 USP22Q9UPT9 525 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 SPEF1Q9Y4P9 236 aa12.62□□□□□ -0.39
TRIM11-205ENST00000602308 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
TRIM11-205ENST00000602308 PCNX3Q9H6A9 2034 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 ZNF814B7Z6K7 855 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 SHISA8B8ZZ34 492 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 GOLGA8MH3BSY2 632 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 CXCL13O43927 109 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 REM1O75628 298 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 LYZL6O75951 148 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 EPB42P16452 691 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 EPHA1P21709 976 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 SNX1Q13596 522 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 MST1LQ2TV78 715 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 HSP90AA5PQ58FG0 334 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 LMNTD2Q8IXW0 634 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 ANKS4BQ8N8V4 417 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 C1orf54Q8WWF1 131 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 MTBPQ96DY7 904 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 WDR34Q96EX3 536 aa12.61□□□□□ -0.39
TRIM11-205ENST00000602308 SLC35A4Q96G79 324 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms