RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NOXRED1Q6NXP6 359 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 SEM1Q6ZVN7 128 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 NUP54Q7Z3B4 507 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 TRIM46Q7Z4K8 759 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 SPATA21Q7Z572 469 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 YRDCQ86U90 279 aaKnown RBP12.56□□□□□ -0.4
SCAF1-203ENST00000598359 FAM9CQ8IZT9 166 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 ACBD4Q8NC06 268 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 OR4N2Q8NGD1 307 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCAF1-203ENST00000598359 RAB3IL1Q8TBN0 382 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 TMEM41AQ96HV5 264 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 EGLN2Q96KS0 407 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 ADOQ96SZ5 270 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 TIMP4Q99727 224 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 ELAC2Q9BQ52 826 aaKnown RBP12.56□□□□□ -0.4
SCAF1-203ENST00000598359 MECRQ9BV79 373 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 OSBPL11Q9BXB4 747 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 FOLH1BQ9HBA9 442 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 SERHLQ9NQF3 203 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 SIRT5Q9NXA8 310 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 KLRF1Q9NZS2 232 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 SLC17A7Q9P2U7 560 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 CCL27Q9Y4X3 112 aa12.56□□□□□ -0.4
SCAF1-203ENST00000598359 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 PRAMEF25A6NGN4 478 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 MYO1GB0I1T2 1018 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 TMEM233B4DJY2 109 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 SEC22BO75396 215 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 ERN1O75460 977 aaKnown RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 HPNP05981 417 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 UROSP10746 265 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 NAGAP17050 411 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 MSX1P28360 303 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 MC3RP41968 323 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 ZFP36L2P47974 494 aaKnown RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 NCBP2P52298 156 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 DCAF7P61962 342 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 ZNF155Q12901 538 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 CEBPEQ15744 281 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 ANKRD26P1Q6NSI1 321 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 TMEM107Q6UX40 140 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 WDR53Q7Z5U6 358 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 SLC44A2Q8IWA5 706 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 OR1J4Q8NGS1 313 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 OR2T11Q8NH01 316 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 ZNF75CPQ92670 426 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 GFM2Q969S9 779 aaKnown RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 VSTM2LQ96N03 204 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 COL21A1Q96P44 957 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 FAM111AQ96PZ2 611 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 BTBD9Q96Q07 612 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 MYNNQ9NPC7 610 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 MIEF1Q9NQG6 463 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 RYDENQ9NUL5 291 aaKnown RBP12.55□□□□□ -0.4
SCAF1-203ENST00000598359 CAMK2AQ9UQM7 478 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 ARL2BPQ9Y2Y0 163 aa12.55□□□□□ -0.4
SCAF1-203ENST00000598359 AZIN1O14977 448 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 SNPHO15079 494 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TO15178 435 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 BIRC5O15392 142 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 CHRNGP07510 517 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 FREM3P0C091 2139 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 LINC00032P0C843 101 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 GABRA1P14867 456 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 IGFBP2P18065 325 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 BMP7P18075 431 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TCEA1P23193 301 aaKnown RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 ALDH3A1P30838 453 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 MPIP34949 423 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TLE4Q04727 773 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 SNTB1Q13884 538 aaKnown RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 ACSF3Q4G176 576 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 SH2D4BQ5SQS7 431 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 OR5M10Q6IEU7 315 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 LARP4Q71RC2 724 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 SAMD14Q8IZD0 417 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 NAXEQ8NCW5 288 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 FAM83FQ8NEG4 500 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TNIP2Q8NFZ5 429 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 CLHC1Q8NHS4 586 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TREX2Q9BQ50 279 aaPredicted RBP12.54□□□□□ -0.4
SCAF1-203ENST00000598359 UGT2B28Q9BY64 529 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 TUBB1Q9H4B7 451 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 GLIPR2Q9H4G4 154 aa12.54□□□□□ -0.4
SCAF1-203ENST00000598359 OR6C70A6NIJ9 312 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 CCT8L1PA6NM43 557 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 B4DXG7 233 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 AKAP10O43572 662 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 PLOD3O60568 738 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 TSPAN2O60636 221 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 TRIM13O60858 407 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 BCAS2O75934 225 aaPredicted RBP12.53□□□□□ -0.4
SCAF1-203ENST00000598359 SSTR2P30874 369 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 SERPINB4P48594 390 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms