RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CD8BP10966 210 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 IL12BP29460 328 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 CPOXP36551 454 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 GSTM5P46439 218 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 ALDH9A1P49189 494 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 SERPINB9P50453 376 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 B3GALT5-AS1P59052 145 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 GANABQ14697 944 aaKnown RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 LTB4RQ15722 352 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 ERCC6LQ2NKX8 1250 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 LETMD1Q6P1Q0 360 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 LARP4Q71RC2 724 aaKnown RBP eCLIP12.64□□□□□ -0.39
VMP1-209ENST00000588915 ZNF572Q7Z3I7 529 aaPredicted RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 C1orf52Q8N6N3 182 aaKnown RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 OR4K17Q8NGC6 315 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 MED18Q9BUE0 208 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 MRPL46Q9H2W6 279 aaKnown RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 FARSBQ9NSD9 589 aaKnown RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 GIMAP4Q9NUV9 329 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 TAS2R9Q9NYW1 312 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 C6orf203Q9P0P8 240 aaPredicted RBP12.64□□□□□ -0.39
VMP1-209ENST00000588915 HEY2Q9UBP5 337 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 ZNF175Q9Y473 711 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 JMJD1CQ15652 2540 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 C16orf97H3BN30 126 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 SIAH2O43255 324 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 TMCC2O75069 709 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
VMP1-209ENST00000588915 ESRRBO95718 433 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 KRT6AP02538 564 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 KRT6BP04259 564 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 INHBAP08476 426 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 MPIP34949 423 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 UGT2B10P36537 528 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
VMP1-209ENST00000588915 KRT6CP48668 564 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 CSTF3Q12996 717 aaKnown RBP12.63□□□□□ -0.39
VMP1-209ENST00000588915 HEPACAMQ14CZ8 416 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 GLYR1Q49A26 553 aaPredicted RBP12.63□□□□□ -0.39
VMP1-209ENST00000588915 CYP27C1Q4G0S4 372 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 BTLAQ7Z6A9 289 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 CNEP1R1Q8N9A8 125 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 TSPYL1Q9H0U9 437 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 FOLH1BQ9HBA9 442 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 PFDN4Q9NQP4 134 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 ZDHHC18Q9NUE0 388 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 KLHL28Q9NXS3 571 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 ZNF225Q9UK10 706 aa12.63□□□□□ -0.39
VMP1-209ENST00000588915 H7C1Q1 480 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 PPP6CO00743 305 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 SLITRK5O94991 958 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 CGAP01215 116 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 POU2F1P14859 743 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 HSD17B3P37058 310 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 CDH13P55290 713 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 CORO7P57737 925 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 RASA2Q15283 850 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 OR5M10Q6IEU7 315 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 GALNT18Q6P9A2 607 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 VWA1Q6PCB0 445 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 PLXDC2Q6UX71 529 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 YTHDF3Q7Z739 585 aaKnown RBP12.62□□□□□ -0.39
VMP1-209ENST00000588915 OR9A2Q8NGT5 310 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 MTBPQ96DY7 904 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 ZNF845Q96IR2 970 aaPredicted RBP12.62□□□□□ -0.39
VMP1-209ENST00000588915 MARK4Q96L34 752 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 Q96MF0 132 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 CCL19Q99731 98 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 GSX2Q9BZM3 304 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 PTGES2Q9H7Z7 377 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 RNF122Q9H9V4 155 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 SLC35C2Q9NQQ7 365 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 SIRT5Q9NXA8 310 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 NINJ2Q9NZG7 142 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 PPP4R1LQ9P1A2 415 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 ZNF180Q9UJW8 692 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 ABCG2Q9UNQ0 655 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
VMP1-209ENST00000588915 A0A087WV62 115 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 A8MT66 165 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 MANBAO00462 879 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 FADS1O60427 444 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 COQ9O75208 318 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 ULK1O75385 1050 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 OR4F21O95013 312 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 IL3P08700 152 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 PAX1P15863 534 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 PPP3CBP16298 524 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 TBXA2RP21731 343 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 CASQ1P31415 396 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 EVI2BP34910 448 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 CLDN15P56746 228 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 RPS3AP61247 264 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms