RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 GPR151Q8TDV0 419 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 PMM1Q92871 262 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 RIT1Q92963 219 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 CCDC74AQ96AQ1 378 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 MVB12AQ96EY5 273 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 POLR1BQ9H9Y6 1135 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 VCX3AQ9NNX9 186 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 TMEM184BQ9Y519 407 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 CLDN16Q9Y5I7 305 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 CEPT1Q9Y6K0 416 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 SDK1Q7Z5N4 2213 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 ARID1BQ8NFD5 2236 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 CDC123O75794 336 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 NKX2-2O95096 273 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 CPNE6O95741 557 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 POU2F1P14859 743 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 RPS4Y1P22090 263 aaKnown RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 TTKP33981 857 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 POU6F2P78424 691 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 FOXD4Q12950 439 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 ERV3-1Q14264 604 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 EIPR1Q53HC9 387 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 SNAP47Q5SQN1 464 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 KLHL17Q6TDP4 642 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 ENTHD1Q8IYW4 607 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 MAML2Q8IZL2 1156 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 OR4C6Q8NH72 309 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 DGAT2Q96PD7 388 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 PELOQ9BRX2 385 aaKnown RBP20.75■□□□□ 0.91
CIRBP-208ENST00000586548 DGCR6LQ9BY27 220 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 POLE3Q9NRF9 147 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 MAN2C1Q9NTJ4 1040 aa20.75■□□□□ 0.91
CIRBP-208ENST00000586548 CCDC160A6NGH7 325 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 AGAP5A6NIR3 686 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 KIAA0513O60268 411 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 OR10H3O60404 316 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 JUNBP17275 347 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-208ENST00000586548 STT3AP46977 705 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 GCGRP47871 477 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 UGT2B15P54855 530 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 BTG2P78543 158 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 BIKQ13323 160 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 CCNJQ5T5M9 372 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 PEAR1Q5VY43 1037 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-208ENST00000586548 Q6ZPB1 254 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-208ENST00000586548 GATAD2AQ86YP4 633 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 SAP25Q8TEE9 199 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 PIK3R3Q92569 461 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 PIGKQ92643 395 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 EDAQ92838 391 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 ZNF578Q96N58 590 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-208ENST00000586548 TSC22D3Q99576 134 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 LMF2Q9BU23 707 aaKnown RBP20.74■□□□□ 0.91
CIRBP-208ENST00000586548 GPR55Q9Y2T6 319 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-208ENST00000586548 TPRKBQ9Y3C4 175 aa20.74■□□□□ 0.91
CIRBP-208ENST00000586548 H3BSA7 217 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 YKT6O15498 198 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 DBIP07108 87 aaKnown RBP20.73■□□□□ 0.91
CIRBP-208ENST00000586548 FMO3P31513 532 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 GABRA3P34903 492 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 PI4KAP42356 2102 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 RGS8P57771 180 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-208ENST00000586548 SERTAD2Q14140 314 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 NR0B2Q15466 257 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 AP1ARQ63HQ0 302 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 PGBD2Q6P3X8 592 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 PODNL1Q6PEZ8 512 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 ZNF836Q6ZNA1 936 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 TTLL10Q6ZVT0 673 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 MED25Q71SY5 747 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 C1orf210Q8IVY1 113 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 DEPDC4Q8N2C3 294 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 CLIP4Q8N3C7 705 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 OR1L3Q8NH93 324 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 FAM81AQ8TBF8 368 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 TUBA1CQ9BQE3 449 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 UCK2Q9BZX2 261 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 FOLH1BQ9HBA9 442 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 SCN3BQ9NY72 215 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 FTSJ1Q9UET6 329 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 RNF6Q9Y252 685 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 CABIN1Q9Y6J0 2220 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 HTR1AP08908 422 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 GALNSP34059 522 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 CRISP1P54107 249 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 TAS2R41P59536 307 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 CSNK2BP67870 215 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 EEF1A1P68104 462 aaKnown RBP20.73■□□□□ 0.91
CIRBP-208ENST00000586548 ZNHIT3Q15649 155 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-208ENST00000586548 GPR68Q15743 365 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 HLA-BQ31612 363 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 SPARTQ8N0X7 666 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 SGCDQ92629 289 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 ANKRD19PQ9H560 264 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 ZNF768Q9H5H4 540 aaKnown RBP20.73■□□□□ 0.91
CIRBP-208ENST00000586548 GMEB2Q9UKD1 530 aa20.73■□□□□ 0.91
CIRBP-208ENST00000586548 HEMK1Q9Y5R4 338 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-208ENST00000586548 ADAMTS20P59510 1910 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 TOX3O15405 576 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-208ENST00000586548 FRS3O43559 492 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms