RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 WDFY4Q6ZS81 3184 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 SH3D21A4FU49 640 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 TRIM64BA6NI03 449 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 COQ9O75208 318 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 PIAS2O75928 621 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ID2Q02363 134 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 PODNL1Q6PEZ8 512 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 FRRS1Q6ZNA5 592 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 AHSA2Q719I0 299 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 VRK2Q86Y07 508 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 COPS4Q9BT78 406 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 POLR2J3Q9H1A7 115 aaKnown RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 GPN2Q9H9Y4 310 aaPredicted RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 LIN28AQ9H9Z2 209 aaKnown RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ADAP2Q9NPF8 381 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ZNF226Q9NYT6 803 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 EPHA6Q9UF33 1036 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 PSORS1C1Q9UIG5 152 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 CLCA1A8K7I4 914 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 TNFRSF10AO00220 468 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 AP3D1O14617 1153 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 CCNYL3P0C7X3 344 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 SLC35E2P0CK97 266 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ACP2P11117 423 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 RNH1P13489 461 aaKnown RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 GSTM3P21266 225 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 MLLT3P42568 568 aaPredicted RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ARRB1P49407 418 aaPredicted RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 NUBP1P53384 320 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 EPHA4P54764 986 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ALDH6A1Q02252 535 aaKnown RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 TARDBPQ13148 414 aaKnown RBP eCLIP21.15■□□□□ 0.982e-6■■■■■ 32.5
CCDC47-204ENST00000582252 DUSP5Q16690 384 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 PRICKLE4Q2TBC4 344 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 INAVAQ3KP66 663 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 GARNL3Q5VVW2 1013 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 OGFOD3Q6PK18 319 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 CD300LDQ6UXZ3 194 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 COMTD1Q86VU5 262 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ARHGEF39Q8N4T4 335 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 OR9A4Q8NGU2 314 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 PMM1Q92871 262 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 CD180Q99467 661 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ELF4Q99607 663 aaPredicted RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 MAP3K3Q99759 626 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 WFDC6Q9BQY6 131 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 QRSL1Q9H0R6 528 aaKnown RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 CLN6Q9NWW5 311 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 PLCL2Q9UPR0 1127 aa21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ZNF443Q9Y2A4 671 aaPredicted RBP21.15■□□□□ 0.98
CCDC47-204ENST00000582252 ADAMTS9Q9P2N4 1935 aa21.14■□□□□ 0.98
CCDC47-204ENST00000582252 FAM86C2PA6NEL3 165 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 TLCD2A6NGC4 264 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 CHST10O43529 356 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 OR10H2O60403 315 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 ATE1O95260 518 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 THBS1P07996 1170 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 GABRB1P18505 474 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 FUT4P22083 530 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 POU1F1P28069 291 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 ST13P50502 369 aaKnown RBP21.14■□□□□ 0.97
CCDC47-204ENST00000582252 ST3GAL3Q11203 375 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 TRAM2Q15035 370 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 C14orf28Q4W4Y0 310 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 TRMT12Q53H54 448 aaKnown RBP21.14■□□□□ 0.97
CCDC47-204ENST00000582252 CCDC81Q6ZN84 652 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 PTCHD4Q6ZW05 846 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 ANKRD13BQ86YJ7 626 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 TMEM52Q8NDY8 209 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 CEP76Q8TAP6 659 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 CHRNA10Q9GZZ6 450 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 RAB33BQ9H082 229 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 MAT2BQ9NZL9 334 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 REV1Q9UBZ9 1251 aa21.14■□□□□ 0.97
CCDC47-204ENST00000582252 FAM227AF5H4B4 570 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 INMTO95050 263 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 FADS2O95864 444 aaKnown RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 GP2P55259 537 aaKnown RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 RGS8P57771 180 aaPredicted RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 FAM53BQ14153 422 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 TCTE1Q5JU00 501 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 EXOSC6Q5RKV6 272 aaKnown RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 SYT6Q5T7P8 510 aaPredicted RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 TYW3Q6IPR3 259 aaKnown RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 COX18Q8N8Q8 333 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 OR4K5Q8NGD3 323 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 OR6C4Q8NGE1 309 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 ZDHHC12Q96GR4 267 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 Q96MT0 163 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 SIGLEC11Q96RL6 698 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 SDF2Q99470 211 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 FUNDC2Q9BWH2 189 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 NAA50Q9GZZ1 169 aaKnown RBP21.13■□□□□ 0.97
CCDC47-204ENST00000582252 ACOT13Q9NPJ3 140 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 ENPP5Q9UJA9 477 aa21.13■□□□□ 0.97
CCDC47-204ENST00000582252 RHPN2P1A8MT19 583 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 H3BN98 237 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 GALR2O43603 387 aaPredicted RBP21.12■□□□□ 0.97
CCDC47-204ENST00000582252 STX11O75558 287 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 BNC1Q01954 994 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms