RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 YIPF4Q9BSR8 244 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 IL1RL2Q9HB29 575 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 SDR39U1Q9NRG7 319 aaPredicted RBP13.97□□□□□ -0.17
LITAF-217ENST00000575426 KLRF1Q9NZS2 232 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 BTNL2Q9UIR0 455 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 CNOT11Q9UKZ1 510 aaKnown RBP13.97□□□□□ -0.17
LITAF-217ENST00000575426 NPIPA1Q9UND3 350 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 TRIM33Q9UPN9 1127 aa13.97□□□□□ -0.17
LITAF-217ENST00000575426 NCKAP5O14513 1909 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 A0A0G2JND7 137 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 PINLYPA6NC86 204 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 ASNA1O43681 348 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 TSPAN2O60636 221 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 UGT2B11O75310 529 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 NKX2-2O95096 273 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 HMGN2P05204 90 aaKnown RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 NCF2P19878 526 aaPredicted RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 UQCRC2P22695 453 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 CASP3P42574 277 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 RFX3P48380 749 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 POLR2JP52435 117 aaKnown RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 LASP1Q14847 261 aaKnown RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 MFSD12Q6NUT3 480 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 SLC30A6Q6NXT4 461 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 BNC2Q6ZN30 1099 aaPredicted RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 TRIML2Q8N7C3 387 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 OR5AK3PQ8NH89 298 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 RFWD2Q8NHY2 731 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 ADAMTS15Q8TE58 950 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 STON2Q8WXE9 905 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 HGDQ93099 445 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 EFHD2Q96C19 240 aaPredicted RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 GIMAP5Q96F15 307 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 C16orf58Q96GQ5 468 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 ZNF597Q96LX8 424 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 GPR137Q96N19 417 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 PANX1Q96RD7 426 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 ANGPTL4Q9BY76 406 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 ACTRT3Q9BYD9 372 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 TTTY12Q9BZ98 90 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 TSPAN10Q9H1Z9 355 aaPredicted RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 RMND5AQ9H871 391 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 TUBA8Q9NY65 449 aaPredicted RBP13.96□□□□□ -0.17
LITAF-217ENST00000575426 B4GALT7Q9UBV7 327 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 PCDHGB3Q9Y5G1 929 aa13.96□□□□□ -0.17
LITAF-217ENST00000575426 A0A0G2JMM0 328 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 RNF103-CHMP3A0A140T963 221 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 A0A1W2PPB8 328 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 A0A1W2PRS3 328 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 FAM234BA2RU67 622 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 FAM166BA8MTA8 275 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 KIR3DP1A8MWS1 328 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 C9JVG2 144 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 SCN2BO60939 215 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 UNC5CO95185 931 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 IL33O95760 270 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 ACP2P11117 423 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 CHI3L1P36222 383 aaPredicted RBP13.95□□□□□ -0.18
LITAF-217ENST00000575426 CLK3P49761 638 aaKnown RBP13.95□□□□□ -0.18
LITAF-217ENST00000575426 TDGF1P3P51864 188 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 PHC1P78364 1004 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 MRPL49Q13405 166 aaKnown RBP13.95□□□□□ -0.18
LITAF-217ENST00000575426 SNTA1Q13424 505 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 CDC73Q6P1J9 531 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 TMEM81Q6P7N7 255 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 COX18Q8N8Q8 333 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 SLC16A11Q8NCK7 471 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 FBXO30Q8TB52 745 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 PRR7Q8TB68 274 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 PIK3R3Q92569 461 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 HOXB13Q92826 284 aaPredicted RBP13.95□□□□□ -0.18
LITAF-217ENST00000575426 RMND5BQ96G75 393 aaPredicted RBP13.95□□□□□ -0.18
LITAF-217ENST00000575426 SLC35G5Q96KT7 338 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 CCDC115Q96NT0 180 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 NODALQ96S42 347 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 STACQ99469 402 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 OSBPL11Q9BXB4 747 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 RABEP2Q9H5N1 569 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 CCDC134Q9H6E4 229 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 ZFP64Q9NPA5 681 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 FGFR1OP2Q9NVK5 253 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 GIN1Q9NXP7 522 aa13.95□□□□□ -0.18
LITAF-217ENST00000575426 DNAJC13O75165 2243 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 GXYLT2A0PJZ3 443 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 PRAMEF25A6NGN4 478 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 DUXAA6NLW8 204 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 CDC40O60508 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
LITAF-217ENST00000575426 ANP32DO95626 131 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 MATN1P21941 496 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 MAP3K8P41279 467 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 UQCRFS1P47985 274 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 MRPL19P49406 292 aaKnown RBP13.94□□□□□ -0.18
LITAF-217ENST00000575426 ATP4BP51164 291 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 KCNK10P57789 538 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 POU6F2P78424 691 aaPredicted RBP13.94□□□□□ -0.18
LITAF-217ENST00000575426 SQLEQ14534 574 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 SLC10A1Q14973 349 aa13.94□□□□□ -0.18
LITAF-217ENST00000575426 DUSP5Q16690 384 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms