RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CHRNA7P36544 502 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 EEFSECP57772 596 aaKnown RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 C1QTNF8P60827 252 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 NFKB2Q00653 900 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SIGLEC14Q08ET2 396 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MAD2L1BPQ15013 274 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 OCLNQ16625 522 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 NDUFAF6Q330K2 333 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CHRFAM7AQ494W8 412 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 KRTCAP3Q53RY4 240 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 LPCAT3Q6P1A2 487 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 ALKAL2Q6UX46 152 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MEX3BQ6ZN04 569 aaKnown RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 ARHGAP12Q8IWW6 846 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 C15orf54Q8N8G6 183 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 OSTF1Q92882 214 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PCED1BQ96HM7 432 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 FCRL1Q96LA6 429 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MCOLN1Q9GZU1 580 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 RNF39Q9H2S5 420 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CDCP1Q9H5V8 836 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CACYBPQ9HB71 228 aaKnown RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CSNK1G1Q9HCP0 422 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 DZANK1Q9NVP4 752 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 TAS2R3Q9NYW6 316 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 STOX2Q9P2F5 926 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 NFKBIL1Q9UBC1 381 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 GPR55Q9Y2T6 319 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 TMEM184BQ9Y519 407 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 GPR45Q9Y5Y3 372 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MICAL3Q7RTP6 2002 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 LRIT2A6NDA9 550 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PTGESO14684 152 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MAFKO60675 156 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PRAMEF2O60811 474 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PCDH8O95206 1070 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 IGLV3-25P01717 112 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 GALTP07902 379 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SULT1A3P0DMM9 295 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SULT1A4P0DMN0 295 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SLC6A2P23975 617 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 S100A2P29034 98 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SERPINF1P36955 418 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 NNMTP40261 264 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CDKN2CP42773 168 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PGGT1BP53609 377 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CDH18Q13634 790 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CSHL1Q14406 222 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 COQ5Q5HYK3 327 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 C19orf48Q6RUI8 117 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 METAP1DQ6UB28 335 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 CASP12Q6UXS9 341 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 GCNT7Q6ZNI0 430 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 C16orf59Q7L2K0 433 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SSX6Q7RTT6 188 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 DNAJB7Q7Z6W7 309 aaPredicted RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MSLNLQ96KJ4 702 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SGCZQ96LD1 299 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 FCRL4Q96PJ5 515 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 RAD9AQ99638 391 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 SF3B5Q9BWJ5 86 aaKnown RBP9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 ASPNQ9BXN1 380 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 ABHD16BQ9H3Z7 469 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MAGEL2Q9UJ55 1249 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 MOKQ9UQ07 419 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 POFUT2Q9Y2G5 429 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PCDHA9Q9Y5H5 950 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
CHRNB1-205ENST00000573209 PLXNA3P51805 1871 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 TMEM72A0PK05 275 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 LGI1O95970 557 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 EGFP01133 1207 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 HTR1EP28566 365 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 TWF1Q12792 350 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 MAP4K2Q12851 820 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 C9orf64Q5T6V5 341 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 BCL2L15Q5TBC7 163 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 LAIR1Q6GTX8 287 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 CLEC9AQ6UXN8 241 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 HSDL2Q6YN16 418 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 CERS6Q6ZMG9 384 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 GDPGP1Q6ZNW5 385 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 LARP4Q71RC2 724 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 ZNF367Q7RTV3 350 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 TRIM46Q7Z4K8 759 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 IQCHQ86VS3 1027 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 Q8N402 240 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 SLC44A3Q8N4M1 653 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 OR2T35Q8NGX2 323 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 C3orf49Q96BT1 292 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 ZNF419Q96HQ0 510 aaPredicted RBP9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 MS4A4EQ96PG1 132 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 RHNO1Q9BSD3 238 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 NDUFAF3Q9BU61 184 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 GSTO2Q9H4Y5 243 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 WDR26Q9H7D7 661 aa9.92□□□□□ -0.82
CHRNB1-205ENST00000573209 ABCB9Q9NP78 766 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms