RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 HTR3DQ70Z44 454 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 LUZP2Q86TE4 346 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 OAFQ86UD1 273 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 OR9A1PQ8NGU1 263 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 SECISBP2Q96T21 854 aaKnown RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 ACAT2Q9BWD1 397 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 DPAGT1Q9H3H5 408 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 MARK1Q9P0L2 795 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 CKAP5Q14008 2032 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 A0A087WUU8 490 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 PLPP1O14494 284 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 IFNA7P01567 189 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 EIF4EP06730 217 aaKnown RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 ACP5P13686 325 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 NPR2P20594 1047 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 THBS2P35442 1172 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 RNF144AP50876 292 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 BAMBIQ13145 260 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 KLHL12Q53G59 568 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 IDNKQ5T6J7 187 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 PXDC1Q5TGL8 231 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 ZNF322Q6U7Q0 402 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 TECPR1Q7Z6L1 1165 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 LMNTD1Q8N9Z9 388 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 HSD17B8Q92506 261 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 ZNF764Q96H86 408 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 RADILQ96JH8 1075 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 ABCG4Q9H172 646 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 ZNF334Q9HCZ1 680 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-215ENST00000566843 BCL2L10Q9HD36 194 aa14.73□□□□□ -0.05
COMMD4-215ENST00000566843 A0A1B0GVI7 797 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 WASH3PC4AMC7 463 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 TBX6O95947 436 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 URODP06132 367 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 PTGS2P35354 604 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 SOX9P48436 509 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 PITPNBP48739 271 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 CCT3P49368 545 aaKnown RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 HSF2Q03933 536 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 HSPB3Q12988 150 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 TSTA3Q13630 321 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 ZNF791Q3KP31 576 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 LGALSLQ3ZCW2 172 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 TXNDC8Q6A555 127 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 BRAT1Q6PJG6 821 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 TMEM220Q6QAJ8 160 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 GPR135Q8IZ08 494 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 BBS10Q8TAM1 723 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 SETD7Q8WTS6 366 aaKnown RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 GLYATL1Q969I3 302 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 VN1R3Q9BXE9 311 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 OR51I1Q9H343 314 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 EVA1BQ9NVM1 165 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 OBSL1O75147 1896 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 MTCL1Q9Y4B5 1905 aaKnown RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 MEIKINA0A087WXM9 373 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 CIB4A0PJX0 185 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 DVL2O14641 736 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 RNF13O43567 381 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 CXCL3P19876 107 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 IFNGR2P38484 337 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 TMEM115Q12893 351 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 SNTA1Q13424 505 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 CAMK2DQ13557 499 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 EXOSC2Q13868 293 aaKnown RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 SLC36A2Q495M3 483 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 SMARCD3Q6STE5 483 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 NPAS4Q8IUM7 802 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 DPCDQ9BVM2 203 aaPredicted RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 SPATA5L1Q9BVQ7 753 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 MRPL9Q9BYD2 267 aaKnown RBP14.72□□□□□ -0.05
COMMD4-215ENST00000566843 KCNN2Q9H2S1 579 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 NUDT15Q9NV35 164 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 MED17Q9NVC6 651 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 UBQLN2Q9UHD9 624 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 FKBP7Q9Y680 259 aa14.72□□□□□ -0.05
COMMD4-215ENST00000566843 TRAV6A0A075B6T7 132 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 TEX13CA0A0J9YWL9 993 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 J3QRE1 110 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 CASC3O15234 703 aaKnown RBP14.71□□□□□ -0.05
COMMD4-215ENST00000566843 SURF4O15260 269 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 SOX30O94993 753 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 MPC2O95563 127 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 TCRBP04435 133 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 RRASP10301 218 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 NR2F1P10589 423 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 HTR1FP30939 366 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 BSGP35613 385 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 RAG2P55895 527 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 MLC1Q15049 377 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 PYHIN1Q6K0P9 492 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 B3GLCTQ6Y288 498 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 KCTD20Q7Z5Y7 419 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 FAM129CQ86XR2 697 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 ADGRG3Q86Y34 549 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 OR4Q3Q8NH05 313 aa14.71□□□□□ -0.05
COMMD4-215ENST00000566843 MRPS31Q92665 395 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms