RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SEPT5Q99719 369 aaPredicted RBP3.9□□□□□ -1.79
LINC00561-201ENST00000565815 CCT7Q99832 543 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 SLC25A23Q9BV35 468 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 TRIM62Q9BVG3 475 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 RHOJQ9H4E5 214 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 FAIMQ9NVQ4 179 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 GIN1Q9NXP7 522 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.9□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM216Q9P0N5 145 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 WDR37Q9Y2I8 494 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 PTPRBP23467 1997 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 SHROOM3Q8TF72 1996 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 A0A0J9YVX5 310 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TCRBV21S2A2A0A5A6 115 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TCRBV3S1A0A5B6 114 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 HEATR9A2RTY3 570 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CDRT15L2A8MXV6 281 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 LACTBL1A8MY62 500 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 RNF103O00237 685 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 B4GALT5O43286 388 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 UGT1A9O60656 530 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 LYPLA1O75608 230 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 LDOC1O95751 146 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 EDN1P05305 212 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF26P17031 533 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 GJA1P17302 382 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CPT2P23786 658 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 NDST1P52848 882 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 PNLIPRP2P54317 469 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 MYBPC1Q00872 1141 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SLC25A52Q3SY17 297 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZBED5Q49AG3 693 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 KRT80Q6KB66 452 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SCYL2Q6P3W7 929 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZCCHC23Q6ZST2 131 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 BNIPLQ7Z465 357 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 GALNT13Q8IUC8 556 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SLC22A9Q8IVM8 553 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CRYBG2Q8N1P7 616 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 MINDY2Q8NBR6 621 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CCDC124Q96CT7 223 aaKnown RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TMCO6Q96DC7 493 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 FEM1CQ96JP0 617 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SLC45A3Q96JT2 553 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF560Q96MR9 790 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 DGAT2Q96PD7 388 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 DOK1Q99704 481 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 GABRG3Q99928 467 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 HOPXQ9BPY8 73 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 MRPL57Q9BQC6 102 aaKnown RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 BCL7BQ9BQE9 202 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 GBA3Q9H227 469 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 DHX35Q9H5Z1 703 aaKnown RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 GAREM1Q9H706 876 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 WDR26Q9H7D7 661 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 C10orf88Q9H8K7 445 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 UGT1A7Q9HAW7 530 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 UGT1A10Q9HAW8 530 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 UGT1A8Q9HAW9 530 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 VANGL2Q9ULK5 521 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SH3GLB1Q9Y371 365 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CHD8Q9HCK8 2581 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 PCNX2A6NKB5 2137 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CCDC160A6NGH7 325 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TRIM64BA6NI03 449 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 AIM2O14862 343 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 XPO1O14980 1071 aaKnown RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZBTB14O43829 449 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SNAP91O60641 907 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 NOL3O60936 208 aaKnown RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 VAPBO95292 243 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ALPLP05186 524 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 IGKV2-30P06310 120 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 C2P06681 752 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 UMPSP11172 480 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 PTGER3P43115 390 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 THOP1P52888 689 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 NME5P56597 212 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TAS2R38P59533 333 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CSNK2A1P68400 391 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CDH17Q12864 832 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 C15orf59Q2T9L4 293 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 PCGF3Q3KNV8 242 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 KRTAP21-3Q3LHN1 58 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ATP13A5Q4VNC0 1218 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TCHHL1Q5QJ38 904 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 C18orf63Q68DL7 685 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 TRNP1Q6NT89 227 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 GPR141Q7Z602 305 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 LRRC49Q8IUZ0 686 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF781Q8N8C0 355 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 CSNK2A3Q8NEV1 391 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 SCARB1Q8WTV0 552 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 NT5C3BQ969T7 300 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 HDAC11Q96DB2 347 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 PGAP3Q96FM1 320 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 HMCESQ96FZ2 354 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 MAGED4Q96JG8 741 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 LRFN5Q96NI6 719 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms