RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 RPP38P78345 283 aaKnown RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 MGAT2Q10469 447 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 SNTB1Q13884 538 aaKnown RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 RNF220Q5VTB9 566 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 BICRALQ6AI39 1079 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 C8orf74Q6P047 294 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 CAPN12Q6ZSI9 719 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 ASRGL1Q7L266 308 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 PATL1Q86TB9 770 aaKnown RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 BIVMQ86UB2 503 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 SPATA24Q86W54 205 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 KIF18BQ86Y91 864 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 MMP21Q8N119 569 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 GOT1L1Q8NHS2 421 aaPredicted RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 SMPDL3BQ92485 455 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 EXT2Q93063 718 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 HGDQ93099 445 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 ISL2Q96A47 359 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 MED30Q96HR3 178 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 DACH2Q96NX9 599 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 PRPF18Q99633 342 aaKnown RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 G6PC3Q9BUM1 346 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 SFXN3Q9BWM7 321 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 KLHL4Q9C0H6 718 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 OR2B2Q9GZK3 357 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 ACTR8Q9H981 624 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 PFDN4Q9NQP4 134 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 ATAD3AQ9NVI7 634 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 TEX10Q9NXF1 929 aaPredicted RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 CLCF1Q9UBD9 225 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 CRNNQ9UBG3 495 aaPredicted RBP7.66□□□□□ -1.18
PALB2-202ENST00000561514 ZNF639Q9UID6 485 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 CES1P1Q9UKY3 287 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 CSPG4Q6UVK1 2322 aa7.66□□□□□ -1.18
PALB2-202ENST00000561514 A0A087X1B8 175 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 A0A1W2PPR1 153 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 TUBAL3A6NHL2 446 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 GLOD5A6NK44 160 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 E9PBE3 544 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 PGRMC2O15173 223 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 TO15178 435 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ACOX3O15254 700 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 SERPINB7O75635 380 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 PPM1BO75688 479 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ACTL6AO96019 429 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 KRT6AP02538 564 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 KRT6BP04259 564 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ATP1B1P05026 303 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ABCB1P08183 1280 aaPredicted RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 CPMP14384 443 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ZNF12P17014 697 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 CD53P19397 219 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ABCD3P28288 659 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 STX2P32856 288 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 NAGLUP54802 743 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 GFRA1P56159 465 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 LSM11P83369 360 aaKnown RBP eCLIP7.65□□□□□ -1.18
PALB2-202ENST00000561514 CALCOCO2Q13137 446 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 SNTA1Q13424 505 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 DDX39BQ13838 428 aaKnown RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 ACAP2Q15057 778 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 FAM83EQ2M2I3 478 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 GGTA1PQ4G0N0 100 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 EIPR1Q53HC9 387 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 TMEM64Q6YI46 380 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 GOLGA7Q7Z5G4 137 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 CXorf67Q86X51 503 aaPredicted RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 C9orf106Q8NAJ2 232 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 WFDC11Q8NEX6 87 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 DOK4Q8TEW6 326 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 KCTD4Q8WVF5 259 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 UCN3Q969E3 161 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ABTB1Q969K4 478 aaPredicted RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 CTHRC1Q96CG8 243 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 NXNL1Q96CM4 212 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 DGCR14Q96DF8 476 aaKnown RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 JSRP1Q96MG2 331 aaPredicted RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 GNRHR2Q96P88 292 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 SERPINI1Q99574 410 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 NUF2Q9BZD4 464 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 NXF5Q9H1B4 397 aaKnown RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 OR10A5Q9H207 317 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 LRMDAQ9H2I8 198 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 GSX1Q9H4S2 264 aaPredicted RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 WDR41Q9HAD4 459 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 PALMDQ9NP74 551 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 BEX4Q9NWD9 120 aaPredicted RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 ALKBH4Q9NXW9 302 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 ZNF180Q9UJW8 692 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 DTX4Q9Y2E6 619 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 SLC6A5Q9Y345 797 aa7.65□□□□□ -1.18
PALB2-202ENST00000561514 TNPO3Q9Y5L0 923 aaKnown RBP7.65□□□□□ -1.18
PALB2-202ENST00000561514 COL6A5A8TX70 2615 aa7.65□□□□□ -1.19
PALB2-202ENST00000561514 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
PALB2-202ENST00000561514 SH3PXD2BA1X283 911 aa7.64□□□□□ -1.19
PALB2-202ENST00000561514 LRRC14BA6NHZ5 514 aa7.64□□□□□ -1.19
PALB2-202ENST00000561514 CLCA1A8K7I4 914 aa7.64□□□□□ -1.19
PALB2-202ENST00000561514 OR7A17O14581 309 aa7.64□□□□□ -1.19
PALB2-202ENST00000561514 RAD51CO43502 376 aa7.64□□□□□ -1.19
PALB2-202ENST00000561514 HCRTR2O43614 444 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms