RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RAB26Q9ULW5 256 aa18.96■□□□□ 0.63
SNRPA1-205ENST00000558036 CLCA3PQ9Y6N3 262 aa18.96■□□□□ 0.63
SNRPA1-205ENST00000558036 EP300Q09472 2414 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-205ENST00000558036 OTOGLQ3ZCN5 2332 aa18.96■□□□□ 0.63
SNRPA1-205ENST00000558036 COL5A1P20908 1838 aaPredicted RBP18.96■□□□□ 0.62
SNRPA1-205ENST00000558036 H0YJX3 145 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 FRS3O43559 492 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 NKX2-2O95096 273 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 PABPC4LP0CB38 370 aaKnown RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ALDH3A2P51648 485 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 CDH12P55289 794 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 SPIBQ01892 262 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 KCNC4Q03721 635 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 OCA2Q04671 838 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ZIK1Q3SY52 487 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 FAM69BQ5VUD6 431 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ISLR2Q6UXK2 745 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 NPSR1Q6W5P4 371 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 DEF8Q6ZN54 512 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 CNBD2Q96M20 576 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 SPATA5L1Q9BVQ7 753 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ZNF350Q9GZX5 532 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 GPR55Q9Y2T6 319 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 CHST2Q9Y4C5 530 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ENPP4Q9Y6X5 453 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 PMS2P1A4D2B8 440 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 MEN1O00255 615 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 FFAR1O14842 300 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 DNAJA1P31689 397 aaKnown RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 RORAP35398 523 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 HSPA13P48723 471 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 POU6F2P78424 691 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 PPP2R2BQ00005 443 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 MED21Q13503 144 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ZNHIT3Q15649 155 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 FAM199XQ6PEV8 388 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 CHDHQ8NE62 594 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 OR52P1PQ8NH57 321 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 PELOQ9BRX2 385 aaKnown RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 LMF2Q9BU23 707 aaKnown RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 OSBPL10Q9BXB5 764 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 ITPAQ9BY32 194 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 IFT80Q9P2H3 777 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 LYVE1Q9Y5Y7 322 aa18.95■□□□□ 0.62
SNRPA1-205ENST00000558036 IGHV3-20A0A0C4DH32 117 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 TEX51A0A1B0GUA7 166 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 PEX12O00623 359 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CNOT3O75175 753 aaKnown RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 KCNK2O95069 426 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 ITGA2P17301 1181 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 MAPK14Q16539 360 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 HOXB13Q92826 284 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 FBXL20Q96IG2 436 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 ZNF347Q96SE7 839 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 TGIF2Q9GZN2 237 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 MTHFD2LQ9H903 347 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 SMPD3Q9NY59 655 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 PDP1Q9P0J1 537 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 NCDNQ9UBB6 729 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 SATB2Q9UPW6 733 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 FAM32AQ9Y421 112 aaKnown RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 PCDHGB3Q9Y5G1 929 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CCDC88CQ9P219 2028 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 FREM2Q5SZK8 3169 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 HS6ST1O60243 411 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CPNE3O75131 537 aaKnown RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 STX11O75558 287 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 DDAH2O95865 285 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CT45A8P0DMV1 189 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CT45A9P0DMV2 189 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 GALNSP34059 522 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 INSM1Q01101 510 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 MC2RQ01718 297 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 BIKQ13323 160 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 ELAVL1Q15717 326 aaKnown RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CT45A2Q5DJT8 189 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 TCTN3Q6NUS6 607 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 HIPK1Q86Z02 1210 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CLIP4Q8N3C7 705 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 OR6T1Q8NGN1 323 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 SLC2A12Q8TD20 617 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 CYGBQ8WWM9 190 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 ZNF578Q96N58 590 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 PIP5K1AQ99755 562 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 PRR14Q9BWN1 585 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 OSBPL11Q9BXB4 747 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 UBAP1Q9NZ09 502 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 KCNE5Q9UJ90 142 aa18.94■□□□□ 0.62
SNRPA1-205ENST00000558036 IGLV3-12A0A075B6K2 115 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 IDSB3KWA1 339 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 TNFRSF11BO00300 401 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 DNAJB5O75953 348 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 CLIC3O95833 236 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 LGI1O95970 557 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 IGKV1D-16P01601 117 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 HBQ1P09105 142 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 GNAO1P09471 354 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 FPR1P21462 350 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 SLC37A1P57057 533 aa18.93■□□□□ 0.62
SNRPA1-205ENST00000558036 OVCH1Q7RTY7 1134 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms