RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 IL12BP29460 328 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 GPC1P35052 558 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 HPCAL1P37235 193 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 MANFP55145 182 aaKnown RBP18.72■□□□□ 0.59
VTI1B-205ENST00000555543 PSPHP78330 225 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 BST1Q10588 318 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 STX3Q13277 289 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 SNTA1Q13424 505 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 ZNF585AQ6P3V2 769 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 R3HCC1LQ7Z5L2 792 aaKnown RBP18.72■□□□□ 0.59
VTI1B-205ENST00000555543 KRTCAP2Q8N6L1 136 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 OR1J4Q8NGS1 313 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 ZFP28Q8NHY6 868 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 SARAFQ96BY9 339 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 TLCD1Q96CP7 247 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 TMCO6Q96DC7 493 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 LMF2Q9BU23 707 aaKnown RBP18.72■□□□□ 0.59
VTI1B-205ENST00000555543 TMBIM4Q9HC24 238 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 EQTNQ9NQ60 294 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 ACSS1Q9NUB1 689 aaPredicted RBP18.72■□□□□ 0.59
VTI1B-205ENST00000555543 HAO1Q9UJM8 370 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 ACAD8Q9UKU7 415 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 MAPRE3Q9UPY8 281 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 KLF2Q9Y5W3 355 aaPredicted RBP18.72■□□□□ 0.59
VTI1B-205ENST00000555543 NOTCH2Q04721 2471 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 C17orf51A8MQB3 221 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 TRAPPC6AO75865 159 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 LAMP1P11279 417 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 PRPS2P11908 318 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 CYP4B1P13584 511 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 ELAVL4P26378 380 aaKnown RBP18.71■□□□□ 0.59
VTI1B-205ENST00000555543 ACVR2AP27037 513 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 HTR1EP28566 365 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 KRT20P35900 424 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 RPL14P50914 215 aaKnown RBP18.71■□□□□ 0.59
VTI1B-205ENST00000555543 PNLIPRP2P54317 469 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 MAGOHP61326 146 aaKnown RBP18.71■□□□□ 0.59
VTI1B-205ENST00000555543 GAB1Q13480 694 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 EFR3AQ14156 821 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 EIPR1Q53HC9 387 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 HHATQ5VTY9 493 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 RTL6Q6ICC9 239 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 WDSUB1Q8N9V3 476 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 MGARPQ8TDB4 240 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 SERHLQ9NQF3 203 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 SIRT3Q9NTG7 399 aaPredicted RBP18.71■□□□□ 0.59
VTI1B-205ENST00000555543 FLRT3Q9NZU0 649 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 CBLCQ9ULV8 474 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.71■□□□□ 0.59
VTI1B-205ENST00000555543 WIF1Q9Y5W5 379 aa18.71■□□□□ 0.59
VTI1B-205ENST00000555543 CACNA1CQ13936 2221 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 GXYLT2A0PJZ3 443 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 FIGNL2A6NMB9 653 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 B4DXG7 233 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 G6PDP11413 515 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 MAP3K8P41279 467 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 GAS1P54826 345 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 NUP107P57740 925 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 CRYZQ08257 329 aaKnown RBP18.7■□□□□ 0.58
VTI1B-205ENST00000555543 CASP8Q14790 479 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 ZNF630Q2M218 657 aaPredicted RBP18.7■□□□□ 0.58
VTI1B-205ENST00000555543 CYP27C1Q4G0S4 372 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 WLSQ5T9L3 541 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 SP5Q6BEB4 398 aaPredicted RBP18.7■□□□□ 0.58
VTI1B-205ENST00000555543 RIMKLAQ8IXN7 391 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 HOXB13Q92826 284 aaPredicted RBP18.7■□□□□ 0.58
VTI1B-205ENST00000555543 SDCCAG3Q96C92 435 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 GIMAP5Q96F15 307 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 AKTIPQ9H8T0 292 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 PNPOQ9NVS9 261 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 NTMQ9P121 344 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 SLC6A5Q9Y345 797 aa18.7■□□□□ 0.58
VTI1B-205ENST00000555543 PHF3Q92576 2039 aaKnown RBP18.69■□□□□ 0.58
VTI1B-205ENST00000555543 C15orf38-AP3S2A0A0A6YYH1 394 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 CLDN14O95500 239 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 PRKAG1P54619 331 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 EMX2Q04743 252 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 PMPCAQ10713 525 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 TOMM20Q15388 145 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 ZNHIT3Q15649 155 aaPredicted RBP18.69■□□□□ 0.58
VTI1B-205ENST00000555543 WIPI1Q5MNZ9 446 aaPredicted RBP18.69■□□□□ 0.58
VTI1B-205ENST00000555543 DCST1Q5T197 706 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 TMEM211Q6ICI0 200 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 SZRD1Q7Z422 152 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 FAM83FQ8NEG4 500 aaPredicted RBP18.69■□□□□ 0.58
VTI1B-205ENST00000555543 NUP43Q8NFH3 380 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 FBXO30Q8TB52 745 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 PIK3R3Q92569 461 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 Q9N2J8 555 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 ASIC5Q9NY37 505 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 RNF6Q9Y252 685 aa18.69■□□□□ 0.58
VTI1B-205ENST00000555543 EIF3LQ9Y262 564 aaKnown RBP18.69■□□□□ 0.58
VTI1B-205ENST00000555543 C19orf84I3L1E1 186 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 WDR1O75083 606 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 SNUPNO95149 360 aaKnown RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 IGKV1D-16P01601 117 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 ACP2P11117 423 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 GABRA3P34903 492 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 EVI2BP34910 448 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms