RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SUMF1Q8NBK3 374 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 ZNF540Q8NDQ6 660 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 STKLD1Q8NE28 680 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 NFAM1Q8NET5 270 aaPredicted RBP4.31□□□□□ -1.72
VRK1-205ENST00000555402 ART4Q93070 314 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 RAB7BQ96AH8 199 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 GPA33Q99795 319 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 POLD4Q9HCU8 107 aa4.31□□□□□ -1.72
VRK1-205ENST00000555402 RCOR3Q9P2K3 495 aaPredicted RBP4.31□□□□□ -1.72
VRK1-205ENST00000555402 MRPL11Q9Y3B7 192 aaKnown RBP4.31□□□□□ -1.72
VRK1-205ENST00000555402 A0A1B0GWJ7 208 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 FOXI3A8MTJ6 420 aaPredicted RBP4.3□□□□□ -1.72
VRK1-205ENST00000555402 SDHDO14521 159 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 LRRTM2O43300 516 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 TOXO94900 526 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 MFN2O95140 757 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 SEMA4FO95754 770 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 CSF2P04141 144 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 HOXB7P09629 217 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 SOX6P35712 828 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 PRPHP41219 470 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 IFNAR2P48551 515 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 ARHGDIAP52565 204 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 TFDP1Q14186 410 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 CRMP1Q14194 572 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 RAB35Q15286 201 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 PCK2Q16822 640 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 C14orf28Q4W4Y0 310 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 FAM182AQ5T1J6 154 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 SEL1L2Q5TEA6 688 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 SLX4IPQ5VYV7 408 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 ASPHD2Q6ICH7 369 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 LEG1Q6P5S2 330 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 SLC39A4Q6P5W5 647 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 ZNF841Q6ZN19 808 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 TIPARPQ7Z3E1 657 aaKnown RBP4.3□□□□□ -1.72
VRK1-205ENST00000555402 PHC2Q8IXK0 858 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 ZNF440Q8IYI8 595 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 ZNF491Q8N8L2 437 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 MRPL13Q9BYD1 178 aaKnown RBP4.3□□□□□ -1.72
VRK1-205ENST00000555402 ADNPQ9H2P0 1102 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 SNX6Q9UNH7 406 aa4.3□□□□□ -1.72
VRK1-205ENST00000555402 IGHV3-16A0A0C4DH30 117 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 FBLL1A6NHQ2 334 aaKnown RBP4.29□□□□□ -1.72
VRK1-205ENST00000555402 SHISA9B4DS77 424 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 E2F3O00716 465 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 TYROBPO43914 113 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 JAK2O60674 1132 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 ASNSP08243 561 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 PSMA5P28066 241 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 BRCC3P46736 316 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 ZNF85Q03923 595 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 ABRAXAS2Q15018 415 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 UBE2V2Q15819 145 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 CCL14Q16627 93 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 CDKN3Q16667 212 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 DCAF4L1Q3SXM0 396 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 VWA2Q5GFL6 755 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 SEL1L3Q68CR1 1132 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 RFWD3Q6PCD5 774 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 CBLN3Q6UW01 205 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 BTNL3Q6UXE8 466 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 GPRIN3Q6ZVF9 776 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 PRSS48Q7RTY5 328 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 DNAJA3Q96EY1 480 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 PSMB7Q99436 277 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 TTYH2Q9BSA4 534 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 TBC1D10AQ9BXI6 508 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 NFKBIZQ9BYH8 718 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 TRIM9Q9C026 710 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 AGPAT5Q9NUQ2 364 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 ZNF446Q9NWS9 450 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 AP4B1Q9Y6B7 739 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 STYXL1Q9Y6J8 313 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 PRSS21Q9Y6M0 314 aa4.29□□□□□ -1.72
VRK1-205ENST00000555402 CCDC7Q96M83 1385 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 LRRC30A6NM36 301 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.28□□□□□ -1.72
VRK1-205ENST00000555402 ANGPT2O15123 496 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 SNRPCP09234 159 aaKnown RBP4.28□□□□□ -1.72
VRK1-205ENST00000555402 ATP6V1C1P21283 382 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 ADSSP30520 456 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 STK19P49842 368 aaPredicted RBP4.28□□□□□ -1.72
VRK1-205ENST00000555402 CYLC2Q14093 348 aaPredicted RBP4.28□□□□□ -1.72
VRK1-205ENST00000555402 GLIPR1L2Q4G1C9 344 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 ZNF506Q5JVG8 444 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 NCR3LG1Q68D85 454 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 LEMD1Q68G75 181 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 SCYL2Q6P3W7 929 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 BLOC1S2Q6QNY1 142 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 HACD2Q6Y1H2 254 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 SLC25A42Q86VD7 318 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 GRAMD2AQ8IUY3 354 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 Q8N377 158 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 GMCL1P1Q8NEA9 526 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms