RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 FAM156AQ8NDB6 213 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 BHLHE23Q8NDY6 225 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 C17orf47Q8NEP4 570 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 IL31RAQ8NI17 732 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 NR4A3Q92570 626 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 RPL36ALQ969Q0 106 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 AP2M1Q96CW1 435 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PDLIM5Q96HC4 596 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 C14orf144Q96I85 54 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF479Q96JC4 524 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CLPTM1LQ96KA5 538 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 RTP3Q9BQQ7 232 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF2Q9BSG1 426 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ALG8Q9BVK2 526 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 QTRT1Q9BXR0 403 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ACTRT3Q9BYD9 372 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 NLNQ9BYT8 704 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 AMBRA1Q9C0C7 1298 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 NMUR2Q9GZQ4 415 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MIXL1Q9H2W2 232 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ANKRD19PQ9H560 264 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PDZD7Q9H5P4 517 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 NANOGQ9H9S0 305 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 GPN2Q9H9Y4 310 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 ZFP14Q9HCL3 533 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 POLD4Q9HCU8 107 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 NANSQ9NR45 359 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SLC6A13Q9NSD5 602 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PNPLA3Q9NST1 481 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MED9Q9NWA0 146 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MCUBQ9NWR8 336 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SMPD3Q9NY59 655 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 COPZ2Q9P299 210 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 PURGQ9UJV8 347 aaKnown RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MKLN1Q9UL63 735 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 SHOC2Q9UQ13 582 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 KLHL20Q9Y2M5 609 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 KCNIP3Q9Y2W7 256 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 Q9Y3F1 56 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 MMACHCQ9Y4U1 282 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 HEMK1Q9Y5R4 338 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CDY1Q9Y6F8 540 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 CLCA3PQ9Y6N3 262 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 KIAA1217Q5T5P2 1943 aa4.15□□□□□ -1.75
ATXN3-227ENST00000554491 LAMA4Q16363 1823 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 MEX3AA1L020 520 aaKnown RBP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 A6NIZ1 184 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF716A6NP11 495 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 WASHC1A8K0Z3 465 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 CYSRT1A8MQ03 144 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 WASH3PC4AMC7 463 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 E7ESA3 106 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 LRRN3E7EW58 273 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 H3BMQ9 156 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 H3BNH8 94 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 M0QYV0 167 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 M0QZ92 97 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 RGS16O15492 202 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 FADS1O60427 444 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 PLIN3O60664 434 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 DTNBO60941 627 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 SDC3O75056 442 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 DNAJB6O75190 326 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 MTX2O75431 263 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 UGT2B17O75795 530 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 TM7SF2O76062 418 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 SRP72O76094 671 aaKnown RBP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 CNTN5O94779 1100 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 TDP2O95551 362 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 GSRP00390 522 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 LDLRP01130 860 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 SERPING1P05155 500 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF735P0CB33 412 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 RRASP10301 218 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 IFI30P13284 250 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 NCF1P14598 390 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 RHCEP18577 417 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 PTNP21246 168 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 CCNOP22674 350 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 CBLP22681 906 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 ADRA1DP25100 572 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 PGM1P36871 562 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 MAP3K8P41279 467 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 MAGEA2P43356 314 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 RPS5P46782 204 aaKnown RBP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 CAPZBP47756 277 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 NRIP1P48552 1158 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 HSPA7P48741 367 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 CEBPDP49716 269 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-227ENST00000554491 MAP2K6P52564 334 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 PPP5CP53041 499 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 RAD23AP54725 363 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 NAGLUP54802 743 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 UGT2B15P54855 530 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 AQP4P55087 323 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 ACTR2P61160 394 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 ARF6P62330 175 aa4.14□□□□□ -1.75
ATXN3-227ENST00000554491 TNNC1P63316 161 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms