RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 DNASE1L3Q13609 305 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 DGCR6Q14129 220 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 IHHQ14623 411 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 IRF3Q14653 427 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF630Q2M218 657 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PGS1Q32NB8 556 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ZFP69Q49AA0 526 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 IFI44LQ53G44 452 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SPIN4Q56A73 249 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 LY6G5CQ5SRR4 150 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PLEKHS1Q5SXH7 462 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 RETSATQ6NUM9 610 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 TRIM40Q6P9F5 258 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 DOK6Q6PKX4 331 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 METAP1DQ6UB28 335 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CCBE1Q6UXH8 406 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 UNC5DQ6UXZ4 953 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 DBX2Q6ZNG2 339 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 TMEM179BQ7Z7N9 219 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PEX5LQ8IYB4 626 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 KLHDC8AQ8IYD2 350 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PIANPQ8IYJ0 282 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 UBQLNLQ8IYU4 475 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ENTHD1Q8IYW4 607 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 METTL4Q8N3J2 472 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 PARP16Q8N5Y8 322 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CLDN22Q8N7P3 220 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 GDPD1Q8N9F7 314 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 OR14C36Q8NHC7 312 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ANGPTL6Q8NI99 470 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 GEMIN6Q8WXD5 167 aaKnown RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 DNASE2BQ8WZ79 361 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 RPL3LQ92901 407 aaKnown RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 MTERF3Q96E29 417 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 LYSMD1Q96S90 227 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 COQ7Q99807 217 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 GABRG3Q99928 467 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 TBCDQ9BTW9 1192 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 GON7Q9BXV9 100 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CIPCQ9C0C6 399 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 C6orf62Q9GZU0 229 aaPredicted RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SLC22A4Q9H015 551 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ZDHHC4Q9NPG8 344 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 SPHK2Q9NRA0 654 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 DNAJC11Q9NVH1 559 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CLN6Q9NWW5 311 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 MRPL39Q9NYK5 338 aaKnown RBP5.58□□□□□ -1.52
VPS33B-203ENST00000554264 EHD3Q9NZN3 535 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 CRLS1Q9UJA2 301 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 STOML2Q9UJZ1 356 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 FREM2Q5SZK8 3169 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 WDFY3Q8IZQ1 3526 aa5.58□□□□□ -1.52
VPS33B-203ENST00000554264 ANKRD12Q6UB98 2062 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 KCNE1BA0A087WTH5 132 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 GLYATL1P3A0A0U1RQE8 302 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TNFRSF11BO00300 401 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 RNASET2O00584 256 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TOR1BO14657 336 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 KMOO15229 486 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 BCAT2O15382 392 aaPredicted RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TAPBPO15533 448 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 RRP8O43159 456 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SEC14L5O43304 696 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 ARHGEF9O43307 516 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TNFSF14O43557 240 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 PCDHGA12O60330 932 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TLR5O60602 858 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SCN2BO60939 215 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 C1QL1O75973 258 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 AP2A2O94973 939 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 PGLSO95336 258 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 CKMT1AP12532 417 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 HLA-EP13747 358 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 AMD1P17707 334 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 ALOX12P18054 663 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SDC1P18827 310 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 PSMA1P25786 263 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 ERP29P30040 261 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 RRM2P31350 389 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 WASP42768 502 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 MAP2K4P45985 399 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 HTR3AP46098 478 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SLC6A12P48065 614 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 RORCP51449 518 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 HMGA2P52926 109 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 IST1P53990 364 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 GNG2P59768 71 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 RHOAP61586 193 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SNRPGP62308 76 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SELENOWP63302 87 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 MRPS15P82914 257 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 SRSF2Q01130 221 aaKnown RBP5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TAF10Q12962 218 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 ASAH1Q13510 395 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 ARHGEF7Q14155 803 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 GBX1Q14549 363 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 GRM7Q14831 915 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 CDK10Q15131 360 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 TAB1Q15750 504 aa5.57□□□□□ -1.52
VPS33B-203ENST00000554264 MAPK11Q15759 364 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms