RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ANKUB1A6NFN9 424 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MGAT4DA6NG13 374 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TLCD2A6NGC4 264 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 ARHGAP42A6NI28 874 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 ARGFXA6NJG6 315 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 A8MXE2 369 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MAGEB17A8MXT2 336 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 INAFM1C9JVW0 142 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 EEF2KO00418 725 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TIMM23O14925 209 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 KMOO15229 486 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 INPP4BO15327 924 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 KCNN4O15554 427 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 LRRTM2O43300 516 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF749O43361 778 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PRPSAP2O60256 369 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CTSVO60911 334 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 POP7O75817 140 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 ZWINTO95229 277 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SMC2O95347 1197 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 BCL10O95999 233 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CALB1P05937 261 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 FGF2P09038 288 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 QDPRP09417 244 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 FAM228BP0C875 321 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 VPREB1P12018 145 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MMP11P24347 488 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PDHA2P29803 388 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PRDX3P30048 256 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PTGER4P35408 488 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 USP8P40818 1118 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 GPR1P46091 355 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 AMTP48728 403 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CCL11P51671 97 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PGGT1BP53609 377 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 HNRNPH2P55795 449 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TPI1P60174 286 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 POLR2FP61218 127 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 NUCB2P80303 420 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PPP2R2BQ00005 443 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 RAD51Q06609 339 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CETN1Q12798 172 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PEX6Q13608 980 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SNTB1Q13884 538 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CAPRIN1Q14444 709 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 NFE2L1Q14494 772 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 NCF4Q15080 339 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SYCP1Q15431 976 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CHRNA6Q15825 494 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SNAPC1Q16533 368 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CTF1Q16619 201 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MEP1AQ16819 746 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 BCL7AQ4VC05 210 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 BOLA3Q53S33 107 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TDRD12Q587J7 1177 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 ARMC12Q5T9G4 340 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MARC1Q5VT66 337 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 ARMC3Q5W041 872 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PDPK2PQ6A1A2 396 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 RAET1GQ6H3X3 334 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 FAM92BQ6ZTR7 304 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 NCCRP1Q6ZVX7 275 aaPredicted RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MARK2Q7KZI7 788 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 LDB1Q86U70 411 aaPredicted RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 GPR180Q86V85 440 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PIANPQ8IYJ0 282 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 BEST3Q8N1M1 668 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 NRACQ8N912 160 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 OR11G2Q8NGC1 345 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 OR2Y1Q8NGV0 311 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 OR2L2Q8NH16 312 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SPATA22Q8NHS9 363 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 GRHL3Q8TE85 626 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 DUSP19Q8WTR2 217 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 NTN5Q8WTR8 489 aaPredicted RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 OIT3Q8WWZ8 545 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 LPGAT1Q92604 370 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 HAS2Q92819 552 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 RMDN2Q96LZ7 410 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 DACH2Q96NX9 599 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 DGAT2Q96PD7 388 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TGM7Q96PF1 710 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SMC6Q96SB8 1091 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 DDOQ99489 341 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TSG101Q99816 390 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TRIM51Q9BSJ1 452 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SLC25A33Q9BSK2 321 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SLC25A23Q9BV35 468 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MLPHQ9BV36 600 aaPredicted RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 XPO4Q9C0E2 1151 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 OR2AG1Q9H205 316 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CLSTN2Q9H4D0 955 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 RAD21L1Q9H4I0 556 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TFB2MQ9H5Q4 396 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TRIM45Q9H8W5 580 aaPredicted RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PFDN4Q9NQP4 134 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 P4HTMQ9NXG6 502 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 TRMT1Q9NXH9 659 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 PCSK1NQ9UHG2 260 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms