RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 CAPNS1P04632 268 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 GPX2P18283 190 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 CBLBQ13191 982 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 LTB4RQ15722 352 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 PIP5KL1Q5T9C9 394 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 ZCCHC12Q6PEW1 402 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 ZNF765Q7L2R6 523 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 TMPRSS9Q7Z410 1059 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 IL22RA1Q8N6P7 574 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 OR52E2Q8NGJ4 325 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 ACOT13Q9NPJ3 140 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 A0A1W2PRQ8 180 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 FAM171A2A8MVW0 826 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 ARL6IP5O75915 188 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 CSN2P05814 226 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 GP1BBP13224 206 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 SLC6A12P48065 614 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 PARM1Q6UWI2 310 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 ZNF550Q7Z398 422 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 CEACAM19Q7Z692 300 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 SLC44A3Q8N4M1 653 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 PLEKHA1Q9HB21 404 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 COMMD9Q9P000 198 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 EXTL2Q9UBQ6 330 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 GRHPRQ9UBQ7 328 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 NAALAD2Q9Y3Q0 740 aa15.35■□□□□ 0.05
CUX1-213ENST00000549414 GASTP01350 101 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 FOXB2Q5VYV0 432 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 IGFN1Q86VF2 1251 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 CHTF18Q8WVB6 975 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 NR4A3Q92570 626 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 MS4A8Q9BY19 250 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 H0Y8X5 98 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 PLPP1O14494 284 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 VNN2O95498 520 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 DBIP07108 87 aaKnown RBP15.34■□□□□ 0.05
CUX1-213ENST00000549414 TACSTD2P09758 323 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 FAUP35544 74 aaKnown RBP15.34■□□□□ 0.05
CUX1-213ENST00000549414 MAP3K8P41279 467 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 SGCBQ16585 318 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 CDH24Q86UP0 819 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 HCAR2Q8TDS4 363 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 ZDHHC12Q96GR4 267 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 NIPSNAP1Q9BPW8 284 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 C8orf33Q9H7E9 229 aaPredicted RBP15.34■□□□□ 0.05
CUX1-213ENST00000549414 TRAPPC13A5PLN9 417 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 SLC9B1P1A6NJY1 282 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 NPC1O15118 1278 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 AHSA1O95433 338 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 PROS1P07225 676 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 CHMP24386 653 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 PPP3R1P63098 170 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 DEFB133Q30KQ1 61 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 PLAG1Q6DJT9 500 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 CCBE1Q6UXH8 406 aaPredicted RBP15.34■□□□□ 0.05
CUX1-213ENST00000549414 B3GLCTQ6Y288 498 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 FAM83HQ6ZRV2 1179 aaPredicted RBP15.34■□□□□ 0.05
CUX1-213ENST00000549414 GAB3Q8WWW8 586 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 MR1Q95460 341 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 GAL3ST3Q96A11 431 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 TIMM29Q9BSF4 260 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 LGR4Q9BXB1 951 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 ALOXE3Q9BYJ1 711 aa15.34■□□□□ 0.05
CUX1-213ENST00000549414 TRBV5-4A0A0C4DH59 114 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 OR6C70A6NIJ9 312 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 IFNA6P05013 189 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 ITGAMP11215 1152 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 ZNF45Q02386 682 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 BORAQ6PGQ7 559 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 SHISA6Q6ZSJ9 500 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 GID4Q8IVV7 300 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 TOMM5Q8N4H5 51 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 GGHQ92820 318 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 OR7D2Q96RA2 312 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 ZDHHC5Q9C0B5 715 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 ENAMQ9NRM1 1142 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 RLIMQ9NVW2 624 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 THAP10Q9P2Z0 257 aaPredicted RBP15.33■□□□□ 0.05
CUX1-213ENST00000549414 CPNE7Q9UBL6 633 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 PRODH2Q9UF12 536 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 DNMT3AQ9Y6K1 912 aaPredicted RBP15.33■□□□□ 0.05
CUX1-213ENST00000549414 SESN1Q9Y6P5 492 aa15.33■□□□□ 0.05
CUX1-213ENST00000549414 SH3D21A4FU49 640 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 KIAA0355O15063 1070 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 KCNJ13O60928 360 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 ITGA10O75578 1167 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 F3P13726 295 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 F8A1P23610 371 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 RABIFP47224 123 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 APOFQ13790 326 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 GPR19Q15760 415 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 AVL9Q8NBF6 648 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 OR8H1Q8NGG4 311 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 FGF22Q9HCT0 170 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 C14orf105Q9NVL8 296 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 NEU3Q9UQ49 428 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 ZNFX1Q9P2E3 1918 aaKnown RBP15.33■□□□□ 0.04
CUX1-213ENST00000549414 DLGAP1O14490 977 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 RNF13O43567 381 aa15.33■□□□□ 0.04
CUX1-213ENST00000549414 CDC40O60508 579 aaKnown RBP eCLIP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms