RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 LINC01555Q8NAE3 123 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 DUSP18Q8NEJ0 188 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR4M2Q8NGB6 313 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR4M1Q8NGD0 313 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZFPM2Q8WW38 1151 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 QRFPRQ96P65 431 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LGR4Q9BXB1 951 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ISG20L2Q9H9L3 353 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 PELI2Q9HAT8 420 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 WASH6PQ9NQA3 447 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LIPT1Q9Y234 373 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 IRAK3Q9Y616 596 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 DOCK9Q9BZ29 2069 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 A0A0A6YYD5 115 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LANCL1O43813 399 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ARSBP15848 533 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ELK1P19419 428 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ATP6V1E1P36543 226 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ST8SIA6P61647 398 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZNF311Q5JNZ3 666 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 CACUL1Q86Y37 369 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR8K5Q8NH50 307 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR5K2Q8NHB8 316 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 BBS10Q8TAM1 723 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 GNPDA2Q8TDQ7 276 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LRRC3BQ96PB8 259 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 SECISBP2Q96T21 854 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 MENTQ9BUN1 341 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 GON7Q9BXV9 100 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 POLMQ9NP87 494 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 GPR34Q9UPC5 381 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 HSPB11Q9Y547 144 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 PCDHGB7Q9Y5F8 929 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 IGKV1-8A0A0C4DH67 115 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZC3H12DA2A288 527 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 HIDE1A8MVS5 230 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 PRRT4C9JH25 899 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 SOCS6O14544 535 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 PROM1O43490 865 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LATO43561 262 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 RHOP08100 348 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 IFI30P13284 250 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ADRB3P13945 408 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 CLDN20P56880 219 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 TAS2R38P59533 333 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 TSPAN31Q12999 210 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LAMTOR1Q6IAA8 161 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 TMEM91Q6ZNR0 172 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ASB18Q6ZVZ8 466 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 POGLUT1Q8NBL1 392 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 SUN3Q8TAQ9 357 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 TRIM63Q969Q1 353 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 CNRIP1Q96F85 164 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZC3HAV1LQ96H79 300 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZNF514Q96K75 400 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZNF649Q9BS31 505 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 DDX31Q9H8H2 851 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 ISYNA1Q9NPH2 558 aa13.26□□□□□ -0.29
RAPGEF3-218ENST00000548919 MAN2B1O00754 1011 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 C1QBP02746 253 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 HLA-DPB1P04440 258 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 OMPP47874 163 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 RAB8AP61006 207 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 IDNKQ5T6J7 187 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 C18orf63Q68DL7 685 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 MRGPREQ86SM8 312 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 ARMC5Q96C12 935 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 TBX5Q99593 518 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 MARVELD1Q9BSK0 173 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 SPATA5L1Q9BVQ7 753 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 HDHD2Q9H0R4 259 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 BCL2L10Q9HD36 194 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 CHST2Q9Y4C5 530 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 ATG4BQ9Y4P1 393 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 SNRNP200O75643 2136 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 IRGMA1A4Y4 181 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 GSAPA4D1B5 854 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 LRIT2A6NDA9 550 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 GTPBP1O00178 669 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 SURF4O15260 269 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR2B3O76000 313 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 PAHP00439 452 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 ADH1AP07327 375 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 CISD3P0C7P0 127 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 NTSP30990 170 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 CLCNKAP51800 687 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 RRAS2P62070 204 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 CSNK1G2P78368 415 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 FZD5Q13467 585 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 DHCR24Q15392 516 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 FNDC3BQ53EP0 1204 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 EOGTQ5NDL2 527 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
RAPGEF3-218ENST00000548919 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms