RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CLPSP04118 112 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 IGKV3-11P04433 115 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CELA2AP08217 269 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 SOX18P35713 384 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 SOX11P35716 441 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CLCN2P51788 898 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 MNAT1P51948 309 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 SLC37A1P57057 533 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 Q0VFX4 171 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 DUSP8Q13202 625 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CAPRIN1Q14444 709 aaKnown RBP11.16□□□□□ -0.62
HDAC7-226ENST00000547259 ABHD17BQ5VST6 288 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 PLAG1Q6DJT9 500 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 XKRXQ6PP77 449 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 SLC29A4Q7RTT9 530 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 SIMC1Q8NDZ2 872 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 M1APQ8TC57 530 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 PNPT1Q8TCS8 783 aaKnown RBP11.16□□□□□ -0.62
HDAC7-226ENST00000547259 LRRC58Q96CX6 371 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 AURKBQ96GD4 344 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-226ENST00000547259 IMMP1LQ96LU5 166 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 GAL3ST4Q96RP7 486 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CGREF1Q99674 301 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 VAPAQ9P0L0 249 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 SLAMF8Q9P0V8 285 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 PRODH2Q9UF12 536 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 PPIEQ9UNP9 301 aaKnown RBP11.16□□□□□ -0.62
HDAC7-226ENST00000547259 ERVK-11Q9UQG0 969 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CFL2Q9Y281 166 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CPAMD8Q8IZJ3 1885 aa11.16□□□□□ -0.62
HDAC7-226ENST00000547259 CACNA1CQ13936 2221 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 SETD2Q9BYW2 2564 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 TRBV5-3A0A0A0MS03 114 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 OR6C76A6NM76 312 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 KRT75O95678 551 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 NPPAP01160 153 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 HOXB9P17482 250 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 AGAP20933 346 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 S1PR1P21453 382 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 PPIBP23284 216 aaKnown RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 PTPN6P29350 595 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 PRIM2P49643 509 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 GPR143P51810 404 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 TDGF1P3P51864 188 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 RIPPLY3P57055 190 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 HLA-DQA1Q5Y7H0 255 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 SAXO2Q658L1 398 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 C6orf89Q6UWU4 347 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 DLEU7Q6UYE1 221 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 HACD2Q6Y1H2 254 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 HSDL2Q6YN16 418 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 BNC2Q6ZN30 1099 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 C6orf120Q7Z4R8 191 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 MSRB3Q8IXL7 192 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 C9orf40Q8IXQ3 194 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 KIF2BQ8N4N8 673 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 AMER2Q8N7J2 671 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF615Q8N8J6 731 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 APCDD1LQ8NCL9 501 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 C16orf52Q8NHV5 167 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 FBXO30Q8TB52 745 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 BRIX1Q8TDN6 353 aaKnown RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 ZFP90Q8TF47 636 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 JADE3Q92613 823 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 NEURL3Q96EH8 262 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 ANKRD27Q96NW4 1050 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 SLC39A3Q9BRY0 314 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 RAD21L1Q9H4I0 556 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 TPT1P8Q9HAU6 139 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 FOLH1BQ9HBA9 442 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 NDE1Q9NXR1 346 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 SLC25A37Q9NYZ2 338 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 NTMQ9P121 344 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 SEC14L3Q9UDX4 400 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 ZNF223Q9UK11 482 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 FAF1Q9UNN5 650 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-226ENST00000547259 PCDHGB6Q9Y5F9 930 aa11.15□□□□□ -0.62
HDAC7-226ENST00000547259 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.63
HDAC7-226ENST00000547259 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 C15orf38-AP3S2A0A0A6YYH1 394 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 TRGV8A0A0C4DH27 118 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 C2orf92A0A1B0GVN3 265 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 EVPLLA8MZ36 301 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 B2RBV5 119 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 FXYD1O00168 92 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 CLIC1O00299 241 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 CCL21O00585 134 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 CDK2AP1O14519 115 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 NME6O75414 186 aaPredicted RBP11.14□□□□□ -0.63
HDAC7-226ENST00000547259 ZFAND5O76080 213 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 PSMG1O95456 288 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 HMGN2P05204 90 aaKnown RBP11.14□□□□□ -0.63
HDAC7-226ENST00000547259 KRT16P08779 473 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 COX6B1P14854 86 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 CA7P43166 264 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 KHKP50053 298 aa11.14□□□□□ -0.63
HDAC7-226ENST00000547259 EMDP50402 254 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms