RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	OR6B1	O95007	311 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	HOXB9	P17482	250 aa	Predicted RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	ABCD3	P28288	659 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	PIGA	P37287	484 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	CD96	P40200	585 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	MAGEA8	P43361	318 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	MAN2A2	P49641	1150 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	TMED10	P49755	219 aa	Known RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	HLCS	P50747	726 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	MRPS22	P82650	360 aa	Known RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	SLC25A3	Q00325	362 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	FADD	Q13158	208 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	KCNAB2	Q13303	367 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	TUBA3C	Q13748	450 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	SELPLG	Q14242	412 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	GPAT3	Q53EU6	434 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	RABL3	Q5HYI8	236 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	CCNJ	Q5T5M9	372 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	TUBA3E	Q6PEY2	450 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	HACD2	Q6Y1H2	254 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	CCDC121	Q6ZUS5	278 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	ARPIN	Q7Z6K5	226 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	CYP4Z2P	Q8N1L4	340 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	OR8J3	Q8NGG0	315 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	OR10A6	Q8NH74	314 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	C9orf43	Q8TAL5	461 aa	Predicted RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	MIPOL1	Q8TD10	442 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	TMEM125	Q96AQ2	219 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	SPACA9	Q96E40	222 aa	Predicted RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	COL21A1	Q96P44	957 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	ADO	Q96SZ5	270 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	SMAD5	Q99717	465 aa	Known RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	CPPED1	Q9BRF8	314 aa	Predicted RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	G6PC3	Q9BUM1	346 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	IKZF5	Q9H5V7	419 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	ZNF71	Q9NQZ8	489 aa	Predicted RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	THUMPD1	Q9NXG2	353 aa	Known RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	NDE1	Q9NXR1	346 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	LRFN1	Q9P244	771 aa		9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	PCDHGA9	Q9Y5G4	932 aa	Known RBP	9.37	□□□□□ -0.91
CPSF7-221	ENST00000543545	OR5H15	A6NDH6	313 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	FXYD1	O00168	92 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	HMGN4	O00479	90 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	ASNA1	O43681	348 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	PPM1B	O75688	479 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	KCNK2	O95069	426 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	NADK	O95544	446 aa	Predicted RBP	9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	IL33	O95760	270 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	AK1	P00568	194 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	NUDT7	P0C024	238 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	FBXO45	P0C2W1	286 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	T-ENOL	P0DO92	83 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	NAGA	P17050	411 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	GPX2	P18283	190 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	SLC6A2	P23975	617 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	MAP3K8	P41279	467 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	SLC7A2	P52569	658 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	MVD	P53602	400 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	FBXW4	P57775	412 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	RPP38	P78345	283 aa	Known RBP	9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	EFR3A	Q14156	821 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	GNA13	Q14344	377 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	OR1C1	Q15619	314 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	LINC00303	Q3SY05	128 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	DCST2	Q5T1A1	773 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	SPINK14	Q6IE38	97 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	RTL4	Q6ZR62	310 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	RINL	Q6ZS11	566 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	ASB18	Q6ZVZ8	466 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	NUP54	Q7Z3B4	507 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	IFNE	Q86WN2	208 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	GPALPP1	Q8IXQ4	340 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	DND1	Q8IYX4	353 aa	Known RBP	9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	DEFB107A	Q8IZN7	70 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	ARMC10	Q8N2F6	343 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	DIO2	Q92813	273 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	HOXB13	Q92826	284 aa	Predicted RBP	9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	TMCO6	Q96DC7	493 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	C5orf34	Q96MH7	638 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	MFRP	Q9BY79	579 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	CACYBP	Q9HB71	228 aa	Known RBP	9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	GIN1	Q9NXP7	522 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	P2RX2	Q9UBL9	471 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	LIPT1	Q9Y234	373 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	AP3M1	Q9Y2T2	418 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	PCDHGB7	Q9Y5F8	929 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	CCDC88C	Q9P219	2028 aa		9.36	□□□□□ -0.91
CPSF7-221	ENST00000543545	OR6C70	A6NIJ9	312 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	GYG2	O15488	501 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	DPM1	O60762	260 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	ABCB7	O75027	752 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	STX11	O75558	287 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	ATP5H	O75947	161 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	UTS2	O95399	124 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	IGKV1D-16	P01601	117 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	BCHE	P06276	602 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	CYP4B1	P13584	511 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	HPGD	P15428	266 aa		9.35	□□□□□ -0.91
CPSF7-221	ENST00000543545	CD46	P15529	392 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms