RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 C1orf74Q96LT6 269 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 SFXN2Q96NB2 322 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 OR4K3Q96R72 315 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 MARVELD1Q9BSK0 173 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 THAP7Q9BT49 309 aaPredicted RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 MS4A7Q9GZW8 240 aaPredicted RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 FXYD6Q9H0Q3 95 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ZDHHC6Q9H6R6 413 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 CLEC2DQ9UHP7 191 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 CACNG2Q9Y698 323 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 NLRC5Q86WI3 1866 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 IRGMA1A4Y4 181 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 RAB19A4D1S5 217 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 TNRC18O15417 2968 aaPredicted RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 STX11O75558 287 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 TSPAN12O95859 305 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 TRBC1P01850 177 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ATXN1LP0C7T5 689 aaKnown RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 FCARP24071 287 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 FEN1P39748 380 aaKnown RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 MLLT11Q13015 90 aaPredicted RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 ZNF234Q14588 700 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 LRRN1Q6UXK5 716 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 CBLL1Q75N03 491 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 GPAT4Q86UL3 456 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 PIANPQ8IYJ0 282 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 SAMD12Q8N8I0 201 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ZFP41Q8N8Y5 198 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 MDGA1Q8NFP4 955 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ZNF671Q8TAW3 534 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 OPALINQ96PE5 141 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 FUZQ9BT04 418 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 METTL17Q9H7H0 456 aaPredicted RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 GPN1Q9HCN4 374 aaPredicted RBP8.21□□□□□ -1.1
DDB1-217ENST00000540166 SLC52A3Q9NQ40 469 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 SEMA3GQ9NS98 782 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 OR6C2Q9NZP2 312 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 RHCGQ9UBD6 479 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 ASB4Q9Y574 426 aa8.21□□□□□ -1.1
DDB1-217ENST00000540166 RP1L1Q8IWN7 2480 aaPredicted RBP8.2□□□□□ -1.1
DDB1-217ENST00000540166 CHP2O43745 196 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 STK16O75716 305 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 RAB36O95755 333 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 DRD5P21918 477 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 MMP12P39900 470 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 SNRPD1P62314 119 aaKnown RBP8.2□□□□□ -1.1
DDB1-217ENST00000540166 SMCO1Q147U7 214 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 MICAQ29983 383 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CD276Q5ZPR3 534 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 LAMTOR1Q6IAA8 161 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CORO6Q6QEF8 472 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 SERPINA11Q86U17 422 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 TMEM17Q86X19 198 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PGBD5Q8N414 524 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 IL17RCQ8NAC3 791 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PROKR2Q8NFJ6 384 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 OR4M2Q8NGB6 313 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PTP4A1Q93096 173 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 RADILQ96JH8 1075 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 GPR137Q96N19 417 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PKMYT1Q99640 499 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 TMEM43Q9BTV4 400 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 SLC29A3Q9BZD2 475 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 BARHL1Q9BZE3 327 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CD244Q9BZW8 370 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 GAREM1Q9H706 876 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 REV1Q9UBZ9 1251 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 RALGAPA2Q2PPJ7 1873 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CHST10O43529 356 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PRAMEF11O60813 436 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CELP19835 753 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PRPS1L1P21108 318 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 ITPKAP23677 461 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 HNF1BP35680 557 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 PTSQ03393 145 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 AKIRIN2Q53H80 203 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 DCST1Q5T197 706 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CPTPQ5TA50 214 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 DUSP18Q8NEJ0 188 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CXorf40AQ8TE69 158 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 GATAD2BQ8WXI9 593 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 TEFMQ96QE5 360 aaKnown RBP8.2□□□□□ -1.1
DDB1-217ENST00000540166 GABARAPL3Q9BY60 117 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 HHATLQ9HCP6 504 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 TMEM138Q9NPI0 162 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 SIRT5Q9NXA8 310 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 GPRC5BQ9NZH0 403 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 MGAT4CQ9UBM8 478 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 FTSJ1Q9UET6 329 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 NCOR2Q9Y618 2525 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 ACACAQ13085 2346 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 A0A1W2PP55 124 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 MANBAO00462 879 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 TNFRSF10BO14763 440 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 GPR39O43194 453 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 CSO75390 466 aaKnown RBP8.2□□□□□ -1.1
DDB1-217ENST00000540166 IGSF6O95976 241 aa8.2□□□□□ -1.1
DDB1-217ENST00000540166 TFP02787 698 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms