RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 CORO7P57737 925 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 GOLGA7Q7Z5G4 137 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 CDKL2Q92772 493 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 TRMT61AQ96FX7 289 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 SLC35A4Q96G79 324 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 TMEM204Q9BSN7 226 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 DSN1Q9H410 356 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 PRODH2Q9UF12 536 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 MRPS18CQ9Y3D5 142 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 ZNF337Q9Y3M9 751 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 TO15178 435 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 ADAM11O75078 769 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 TNFRSF21O75509 655 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 SOD3P08294 240 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 CTAGE8P0CG41 777 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 MTHFD2P13995 350 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 GFAPP14136 432 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 KRT20P35900 424 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 GP5P40197 560 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 MAPK12P53778 367 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 EEFSECP57772 596 aaKnown RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 STX5Q13190 355 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 GUSBP1Q15486 140 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 PFKFB4Q16877 469 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 KRTAP24-1Q3LI83 254 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 SLC48A1Q6P1K1 146 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 STAC2Q6ZMT1 411 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 LARP4Q71RC2 724 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 FAM214BQ7L5A3 538 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 ZNF572Q7Z3I7 529 aaPredicted RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 TBC1D1Q86TI0 1168 aaPredicted RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 CTAGE4Q8IX94 777 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 SPATA4Q8NEY3 305 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 EFHD2Q96C19 240 aaPredicted RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 NXNL1Q96CM4 212 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 SERPINI1Q99574 410 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 CPNE1Q99829 537 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 ACTR6Q9GZN1 396 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 STMN4Q9H169 189 aaPredicted RBP13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 IPPKQ9H8X2 491 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 NMRAL1Q9HBL8 299 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 MED11Q9P086 117 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 CES1P1Q9UKY3 287 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 PCDHA9Q9Y5H5 950 aa13.13□□□□□ -0.31
CCDC144NL-202ENST00000539177 C1orf226A1L170 272 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 E7ESA3 106 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 OVOL3O00110 214 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 TP73O15350 636 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 CLOCKO15516 846 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 TSPAN2O60636 221 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 NDUFS7O75251 213 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 SEMA3DO95025 777 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 PPP3CBP16298 524 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 ALDH9A1P49189 494 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 GAS1P54826 345 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 SRSF2Q01130 221 aaKnown RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 DR1Q01658 176 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 FAPQ12884 760 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 EFR3AQ14156 821 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 ETFDHQ16134 617 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 SGCBQ16585 318 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 CTAGE3PQ8IX95 158 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 GBP7Q8N8V2 638 aaPredicted RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 OR2M3Q8NG83 312 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 KCTD4Q8WVF5 259 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 NEUROG1Q92886 237 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 FBXW5Q969U6 566 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 L2HGDHQ9H9P8 463 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 PFDN4Q9NQP4 134 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 LIPT1Q9Y234 373 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 GPR55Q9Y2T6 319 aaPredicted RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 ZNF175Q9Y473 711 aa13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 MAGED1Q9Y5V3 778 aaPredicted RBP13.12□□□□□ -0.31
CCDC144NL-202ENST00000539177 OR2M5A3KFT3 312 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 SHISA8B8ZZ34 492 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 GMFGO60234 142 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 GPRIN2O60269 458 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 UGDHO60701 494 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 SIX3O95343 332 aaPredicted RBP13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 IGHV4-39P01824 125 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 FAM157CP0CG43 387 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 CT45A8P0DMV1 189 aa13.11□□□□□ -0.31
CCDC144NL-202ENST00000539177 CT45A9P0DMV2 189 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms