RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 VASH2Q86V25 355 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 SLC30A8Q8IWU4 369 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 AMER2Q8N7J2 671 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 STMN2Q93045 179 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
CD4-208ENST00000538827 LMF2Q9BU23 707 aaKnown RBP13.12□□□□□ -0.31
CD4-208ENST00000538827 GPR87Q9BY21 358 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 PIGUQ9H490 435 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 PRORYQ9H606 182 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 Q9N2J8 555 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 OR10H1Q9Y4A9 318 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 NSG1A0A0A6YYJ2 146 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 OR6C76A6NM76 312 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 A8MVJ9 347 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 SOCS6O14544 535 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 PCDH17O14917 1159 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 CREG1O75629 220 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 ZNF682O95780 498 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 SERPINA1P01009 418 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 OPN1SWP03999 348 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 LIFP15018 202 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 CRISP3P54108 245 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 MRPS22P82650 360 aaKnown RBP13.11□□□□□ -0.31
CD4-208ENST00000538827 GNA13Q14344 377 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 SSPNQ14714 243 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 EBPQ15125 230 aaKnown RBP13.11□□□□□ -0.31
CD4-208ENST00000538827 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 CCNJQ5T5M9 372 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 REEP3Q6NUK4 255 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 NPSR1Q6W5P4 371 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 NFAM1Q8NET5 270 aaPredicted RBP13.11□□□□□ -0.31
CD4-208ENST00000538827 BBS10Q8TAM1 723 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 SLC26A7Q8TE54 656 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 SLC38A5Q8WUX1 472 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 VSTM2LQ96N03 204 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 STACQ99469 402 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 CACYBPQ9HB71 228 aaKnown RBP13.11□□□□□ -0.31
CD4-208ENST00000538827 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 DUSP22Q9NRW4 184 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 IL17BQ9UHF5 180 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
CD4-208ENST00000538827 C2orf92A0A1B0GVN3 265 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 TTC36A6NLP5 189 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 TERTO14746 1132 aaKnown RBP13.1□□□□□ -0.31
CD4-208ENST00000538827 PRKNO60260 465 aaPredicted RBP13.1□□□□□ -0.31
CD4-208ENST00000538827 ENTPD5O75356 428 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 PDE9AO76083 593 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 NKX2-2O95096 273 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 H6PDO95479 791 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 AK1P00568 194 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 CHRM4P08173 479 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 CELA2AP08217 269 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 TFPTP0C1Z6 253 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
CD4-208ENST00000538827 ACTR3P61158 418 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 VEZF1Q14119 521 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 MYBPC3Q14896 1274 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 EXT1Q16394 746 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 FXNQ16595 210 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 TBC1D25Q3MII6 688 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 FIGNL1Q6PIW4 674 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 KIRREL2Q6UWL6 708 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 HSDL2Q6YN16 418 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 MRGPREQ86SM8 312 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 DTX1Q86Y01 620 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 OR11G2Q8NGC1 345 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 THAP3Q8WTV1 239 aaPredicted RBP13.1□□□□□ -0.31
CD4-208ENST00000538827 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
CD4-208ENST00000538827 VPS50Q96JG6 964 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 BTBD9Q96Q07 612 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 BTBD2Q9BX70 525 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 WWTR1Q9GZV5 400 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 RUBCNLQ9H714 662 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 CALML5Q9NZT1 146 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 ZNF223Q9UK11 482 aaPredicted RBP13.1□□□□□ -0.31
CD4-208ENST00000538827 LIPT1Q9Y234 373 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 PCDHGB3Q9Y5G1 929 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 AHCTF1Q8WYP5 2266 aa13.1□□□□□ -0.31
CD4-208ENST00000538827 PRAMEF27A3QJZ7 478 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 CDC14CA4D256 554 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 PEX12O00623 359 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 ATP6V1C1P21283 382 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 CLCN2P51788 898 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 NR0B1P51843 470 aaKnown RBP13.09□□□□□ -0.31
CD4-208ENST00000538827 PSG6Q00889 435 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 KCNC4Q03721 635 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 ATP1A4Q13733 1029 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 MAPK11Q15759 364 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 EXOSC6Q5RKV6 272 aaKnown RBP13.09□□□□□ -0.31
CD4-208ENST00000538827 LRRC69Q6ZNQ3 347 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 NDUFAF7Q7L592 441 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms