RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RNF6	Q9Y252	685 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LOC100509620	A0A075B734	347 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CDC14C	A4D256	554 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LDB3	O75112	727 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	BPNT1	O95861	308 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	GNRHR	P30968	328 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HSD17B7	P56937	341 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	WSCD2	Q2TBF2	565 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZBED5	Q49AG3	693 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TMEM31	Q5JXX7	168 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	C6orf132	Q5T0Z8	1188 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	BCL2L15	Q5TBC7	163 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TUBA3E	Q6PEY2	450 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR4K13	Q8NH42	304 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MAFA	Q8NHW3	353 aa	Predicted RBP	14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ARRDC2	Q8TBH0	407 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF480	Q8WV37	535 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	DNTTIP1	Q9H147	329 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SOX17	Q9H6I2	414 aa	Predicted RBP	14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PADI1	Q9ULC6	663 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SLC35F4	A4IF30	521 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	RBMX	P38159	391 aa	Known RBP	14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF789	Q5FWF6	425 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NRM	Q8IXM6	262 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ACBD7	Q8N6N7	88 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR5K2	Q8NHB8	316 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR14A16	Q8NHC5	309 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	RAB9B	Q9NP90	201 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ITGB1BP2	Q9UKP3	347 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CAMK2A	Q9UQM7	478 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HIST1H1T	P22492	207 aa	Predicted RBP	14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	RGR	P47804	291 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MZT1	Q08AG7	82 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PAQR9	Q6ZVX9	377 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF595	Q8IYB9	648 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR52R1	Q8NGF1	315 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	THAP6	Q8TBB0	222 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TWSG1	Q9GZX9	223 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PARPBP	Q9NWS1	579 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SH3D21	A4FU49	640 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	GPR75	O95800	540 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LCAT	P04180	440 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF806	P0C7X5	589 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CFL1	P23528	166 aa	Known RBP	14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ACVR1B	P36896	505 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	S100A10	P60903	97 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NKX3-2	P78367	333 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LETMD1	Q6P1Q0	360 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR4K5	Q8NGD3	323 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ICK	Q9UPZ9	632 aa		14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NOP16	Q9Y3C1	178 aa	Known RBP	14.87	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TRBV2	A0A0J9YWF9	115 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR1D4	P47884	311 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	EEF1A1	P68104	462 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PKDCC	Q504Y2	493 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HS3ST5	Q8IZT8	346 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	WDR20	Q8TBZ3	569 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ASB16	Q96NS5	453 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR6C1	Q96RD1	312 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ADO	Q96SZ5	270 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	FUZ	Q9BT04	418 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SLC6A14	Q9UN76	642 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	KIAA0100	Q14667	2235 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	RNASET2	O00584	256 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	GALR3	O60755	368 aa	Predicted RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HPR	P00739	348 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ADA	P00813	363 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	RGN	Q15493	299 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MRPL21	Q7Z2W9	205 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TRAPPC6B	Q86SZ2	158 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	FOXRED2	Q8IWF2	684 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR9A4	Q8NGU2	314 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TCEAL3	Q969E4	200 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MYNN	Q9NPC7	610 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PCDHB10	Q9UN67	800 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PCDHA9	Q9Y5H5	950 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	C4A	P0C0L4	1744 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532		H0YGG7	62 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	DIRAS3	O95661	229 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ARF3	P61204	181 aa	Predicted RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ADAMTSL4	Q6UY14	1074 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PTER	Q96BW5	349 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MUCL1	Q96DR8	90 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SLC22A12	Q96S37	553 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ENKD1	Q9H0I2	346 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MYH13	Q9UKX3	1938 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	IL32	P24001	234 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MAGEA2	P43356	314 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	INHBC	P55103	352 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	BNIP3	Q12983	259 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	KCNAB2	Q13303	367 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF367	Q7RTV3	350 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SYNPO	Q8N3V7	929 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CHFR	Q96EP1	664 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	USB1	Q9BQ65	265 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TMEM45A	Q9NWC5	275 aa		14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CCDC59	Q9P031	241 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PTBP2	Q9UKA9	531 aa	Known RBP	14.86	□□□□□ -0.03
NCAPD3-213	ENST00000534532	KANTR	A0A1W2PQU2	76 aa		14.85	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms