RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SRYQ05066 204 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 STX5Q13190 355 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 SNTA1Q13424 505 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 SNTB1Q13884 538 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 ZNHIT3Q15649 155 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 HSPB2Q16082 182 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 ARL13AQ5H913 290 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 KANK2Q63ZY3 851 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TMEM81Q6P7N7 255 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 EMBQ6PCB8 327 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 Q6ZSR9 355 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 SEM1Q6ZVN7 128 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 IKBIPQ70UQ0 350 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 PLCZ1Q86YW0 608 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 LACC1Q8IV20 430 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 WDSUB1Q8N9V3 476 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TNIP2Q8NFZ5 429 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 OR4K17Q8NGC6 315 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TCP10LQ8TDR4 215 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 AENQ8WTP8 325 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TWIST2Q8WVJ9 160 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 CIDECQ96AQ7 238 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 ZBTB9Q96C00 473 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 PPCDCQ96CD2 204 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 ELP4Q96EB1 424 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 SLC35A4Q96G79 324 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 ZNF559Q9BR84 538 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TRMOQ9BU70 441 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TUBB1Q9H4B7 451 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 EML4Q9HC35 981 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 MKS1Q9NXB0 559 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 SH3BP4Q9P0V3 963 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 GIMAP2Q9UG22 337 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 BAIAP2L1Q9UHR4 511 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 LGALS13Q9UHV8 139 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 FBXL2Q9UKC9 423 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 C19orf53Q9UNZ5 99 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 WBP11Q9Y2W2 641 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 CCL27Q9Y4X3 112 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 WIF1Q9Y5W5 379 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 FBN2P35556 2912 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TEP1Q99973 2627 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 PDZD2O15018 2839 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 A0A087WV62 115 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 C17orf51A8MQB3 221 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 UPK1AO00322 258 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 DVL2O14641 736 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PIP5K1BO14986 540 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 NPHS1O60500 1241 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 SKAP2O75563 359 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 CBR3O75828 277 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 EPPINO95925 133 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 IL2RAP01589 272 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 CREB1P16220 341 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 SDC1P18827 310 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 EFNA1P20827 205 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PRPH2P23942 346 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 GRK2P25098 689 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 GABRA3P34903 492 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 STARP49675 285 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 AGFG1P52594 562 aaKnown RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PNLIPRP2P54317 469 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PSG6Q00889 435 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 RCAN2Q14206 197 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 KIAA0040Q15053 153 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 SF3B4Q15427 424 aaKnown RBP eCLIP9.5□□□□□ -0.892e-7■■■■■ 32.9
CAPN1-225ENST00000533704 DECR1Q16698 335 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 SLC25A35Q3KQZ1 300 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 RFTN2Q52LD8 501 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 TMEM200AQ86VY9 491 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 IFNEQ86WN2 208 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 TRIM42Q8IWZ5 723 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 NAXEQ8NCW5 288 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 ZFP28Q8NHY6 868 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 FBXO30Q8TB52 745 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 C14orf79Q96F83 325 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 WDYHV1Q96HA8 205 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 METTL2AQ96IZ6 378 aaKnown RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 SFXN2Q96NB2 322 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 CCT7Q99832 543 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 ROPN1BQ9BZX4 212 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 OR2B2Q9GZK3 357 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PRDM14Q9GZV8 571 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 REEP4Q9H6H4 257 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 ROPN1Q9HAT0 212 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 MCCC2Q9HCC0 563 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 Q9N2J8 555 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 TAS2R10Q9NYW0 307 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 TAS2R7Q9NYW3 318 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 FLRT3Q9NZU0 649 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PPP4R1LQ9P1A2 415 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 CBLCQ9ULV8 474 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 RPH3AQ9Y2J0 694 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-225ENST00000533704 TRAF6Q9Y4K3 522 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 PCDHGB3Q9Y5G1 929 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 DNAJC15Q9Y5T4 150 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 TACC2O95359 2948 aa9.5□□□□□ -0.89
CAPN1-225ENST00000533704 GXYLT2A0PJZ3 443 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms